Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.39■□□□□ 0.86
SNAP47Q5SQN1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNAP47Q5SQN1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNAP47Q5SQN1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNAP47Q5SQN1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SNAP47Q5SQN1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 LINC00565-201ENST00000562710 2331 ntBASIC20.38■□□□□ 0.85
SNAP47Q5SQN1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 CNN2P6-201ENST00000439038 900 ntBASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 AC008175.2-201ENST00000612840 297 ntBASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAP47Q5SQN1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 SLC29A4P1-201ENST00000398760 971 ntBASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 AC120498.10-201ENST00000621827 505 ntBASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNAP47Q5SQN1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 TSPY6P-201ENST00000448518 926 ntBASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 TERF1P5-201ENST00000477545 1207 ntBASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 AC105036.2-201ENST00000569468 176 ntBASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.35■□□□□ 0.85
SNAP47Q5SQN1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNAP47Q5SQN1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 AF201337.1-201ENST00000520239 748 ntBASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms