Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VMA21Q3ZAQ7 AC005224.4-201ENST00000583262 1652 ntBASIC16.96■□□□□ 0.31
VMA21Q3ZAQ7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VMA21Q3ZAQ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.96■□□□□ 0.31
VMA21Q3ZAQ7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
VMA21Q3ZAQ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.96■□□□□ 0.3
VMA21Q3ZAQ7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 AC142381.2-201ENST00000566120 298 ntBASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 AC005229.4-201ENST00000610085 2198 ntBASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VMA21Q3ZAQ7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 AC055733.4-201ENST00000638462 1354 ntBASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 AL031432.3-201ENST00000607698 485 ntBASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VMA21Q3ZAQ7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 AL354811.1-201ENST00000610286 706 ntBASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VMA21Q3ZAQ7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 SUDS3P1-201ENST00000505831 966 ntBASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 AL024507.2-201ENST00000606070 2574 ntBASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VMA21Q3ZAQ7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms