Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 MEC1YBR136W 7107 nt2.4□□□□□ -2.02
TY1B-JR1P47098 PFD1YJL179W 330 nt2.4□□□□□ -2.03
TY1B-JR1P47098 YJR023CYJR023C 402 nt2.4□□□□□ -2.03
TY1B-JR1P47098 DID4YKL002W 699 nt2.4□□□□□ -2.03
TY1B-JR1P47098 DAD2YKR083C 402 nt2.4□□□□□ -2.03
TY1B-JR1P47098 DSE3YOR264W 1293 nt2.4□□□□□ -2.03
TY1B-JR1P47098 DAD3YBR233W-A 285 nt2.4□□□□□ -2.03
TY1B-JR1P47098 LDB17YDL146W 1476 nt2.4□□□□□ -2.03
TY1B-JR1P47098 HSL1YKL101W 4557 nt2.4□□□□□ -2.03
TY1B-JR1P47098 GEA2YEL022W 4380 nt2.39□□□□□ -2.03
TY1B-JR1P47098 LAP3YNL239W 1365 nt2.39□□□□□ -2.03
TY1B-JR1P47098 SMI1YGR229C 1518 nt2.39□□□□□ -2.03
TY1B-JR1P47098 HMO1YDR174W 741 nt2.38□□□□□ -2.03
TY1B-JR1P47098 PHS1YJL097W 654 nt2.38□□□□□ -2.03
TY1B-JR1P47098 SPO20YMR017W 1194 nt2.38□□□□□ -2.03
TY1B-JR1P47098 RPS30BYOR182C 192 nt2.38□□□□□ -2.03
TY1B-JR1P47098 SSF1YHR066W 1362 nt2.38□□□□□ -2.03
TY1B-JR1P47098 SOK2YMR016C 2358 nt2.38□□□□□ -2.03
TY1B-JR1P47098 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
TY1B-JR1P47098 YGL176CYGL176C 1665 nt2.37□□□□□ -2.03
TY1B-JR1P47098 YDR261W-BYDR261W-B 5313 nt2.37□□□□□ -2.03
TY1B-JR1P47098 DNF3YMR162C 4971 nt2.37□□□□□ -2.03
TY1B-JR1P47098 CPR5YDR304C 678 nt2.37□□□□□ -2.03
TY1B-JR1P47098 YOR146WYOR146W 306 nt2.37□□□□□ -2.03
TY1B-JR1P47098 RRI1YDL216C 1323 nt2.36□□□□□ -2.03
TY1B-JR1P47098 ENV10YLR065C 546 nt2.36□□□□□ -2.03
TY1B-JR1P47098 POC4YPL144W 447 nt2.36□□□□□ -2.03
TY1B-JR1P47098 YLR419WYLR419W 4308 nt2.36□□□□□ -2.03
TY1B-JR1P47098 RSM25YIL093C 795 nt2.36□□□□□ -2.03
TY1B-JR1P47098 AIM23YJL131C 1071 nt2.36□□□□□ -2.03
TY1B-JR1P47098 COQ9YLR201C 783 nt2.36□□□□□ -2.03
TY1B-JR1P47098 PGS1YCL004W 1566 nt2.36□□□□□ -2.03
TY1B-JR1P47098 YDR210W-BYDR210W-B 5313 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PAU2YEL049W 363 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PAU12YGR294W 363 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PAU18YLL064C 363 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PDR8YLR266C 2106 nt2.35□□□□□ -2.03
TY1B-JR1P47098 CPR8YNR028W 927 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PAU6YNR076W 363 nt2.35□□□□□ -2.03
TY1B-JR1P47098 PAU24YBR301W 363 nt2.35□□□□□ -2.03
TY1B-JR1P47098 HDA2YDR295C 2025 nt2.35□□□□□ -2.03
TY1B-JR1P47098 RNY1YPL123C 1305 nt2.34□□□□□ -2.03
TY1B-JR1P47098 SEC65YML105C 822 nt2.34□□□□□ -2.03
TY1B-JR1P47098 PHO2YDL106C 1680 nt2.33□□□□□ -2.04
TY1B-JR1P47098 MED2YDL005C 1296 nt2.33□□□□□ -2.04
TY1B-JR1P47098 SWC4YGR002C 1431 nt2.33□□□□□ -2.04
TY1B-JR1P47098 MSH5YDL154W 2706 nt2.33□□□□□ -2.04
TY1B-JR1P47098 TRZ1YKR079C 2517 nt2.33□□□□□ -2.04
TY1B-JR1P47098 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
TY1B-JR1P47098 ISW1YBR245C 3390 nt2.33□□□□□ -2.04
TY1B-JR1P47098 OKP1YGR179C 1221 nt2.33□□□□□ -2.04
TY1B-JR1P47098 LSM1YJL124C 519 nt2.33□□□□□ -2.04
TY1B-JR1P47098 RPS1AYLR441C 768 nt2.33□□□□□ -2.04
TY1B-JR1P47098 UTP21YLR409C 2820 nt2.32□□□□□ -2.04
TY1B-JR1P47098 YJU2YKL095W 837 nt2.32□□□□□ -2.04
TY1B-JR1P47098 ATP11YNL315C 957 nt2.32□□□□□ -2.04
TY1B-JR1P47098 HUA2YOR284W 732 nt2.32□□□□□ -2.04
TY1B-JR1P47098 YPR027CYPR027C 834 nt2.32□□□□□ -2.04
TY1B-JR1P47098 MDM10YAL010C 1482 nt2.32□□□□□ -2.04
TY1B-JR1P47098 CWC22YGR278W 1734 nt2.31□□□□□ -2.04
TY1B-JR1P47098 HMT1YBR034C 1047 nt2.31□□□□□ -2.04
TY1B-JR1P47098 TOP1YOL006C 2310 nt2.31□□□□□ -2.04
TY1B-JR1P47098 NOP14YDL148C 2433 nt2.31□□□□□ -2.04
TY1B-JR1P47098 NAN1YPL126W 2691 nt2.31□□□□□ -2.04
TY1B-JR1P47098 NRP1YDL167C 2160 nt2.31□□□□□ -2.04
TY1B-JR1P47098 TRX1YLR043C 312 nt2.31□□□□□ -2.04
TY1B-JR1P47098 YOL057WYOL057W 2136 nt2.3□□□□□ -2.04
TY1B-JR1P47098 PHO12YHR215W 1404 nt2.3□□□□□ -2.04
TY1B-JR1P47098 PHO11YAR071W 1404 nt2.3□□□□□ -2.04
TY1B-JR1P47098 SRG1SRG1 551 nt2.3□□□□□ -2.04
TY1B-JR1P47098 SMX2YFL017W-A 234 nt2.3□□□□□ -2.04
TY1B-JR1P47098 SWD3YBR175W 948 nt2.3□□□□□ -2.04
TY1B-JR1P47098 ROM2YLR371W 4071 nt2.3□□□□□ -2.04
TY1B-JR1P47098 CTF13YMR094W 1437 nt2.29□□□□□ -2.04
TY1B-JR1P47098 YJR056CYJR056C 711 nt2.29□□□□□ -2.04
TY1B-JR1P47098 REC102YLR329W 795 nt2.29□□□□□ -2.04
TY1B-JR1P47098 ATG34YOL083W 1239 nt2.29□□□□□ -2.04
TY1B-JR1P47098 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
TY1B-JR1P47098 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
TY1B-JR1P47098 YDR401WYDR401W 564 nt2.28□□□□□ -2.04
TY1B-JR1P47098 YFR045WYFR045W 930 nt2.28□□□□□ -2.04
TY1B-JR1P47098 YGR293CYGR293C 462 nt2.28□□□□□ -2.04
TY1B-JR1P47098 YML094C-AYML094C-A 402 nt2.28□□□□□ -2.04
TY1B-JR1P47098 RRP7YCL031C 894 nt2.28□□□□□ -2.04
TY1B-JR1P47098 MSM1YGR171C 1728 nt2.28□□□□□ -2.04
TY1B-JR1P47098 GNT1YOR320C 1476 nt2.28□□□□□ -2.04
TY1B-JR1P47098 PRP6YBR055C 2700 nt2.28□□□□□ -2.04
TY1B-JR1P47098 GPP2YER062C 753 nt2.28□□□□□ -2.04
TY1B-JR1P47098 VBA4YDR119W 2307 nt2.27□□□□□ -2.05
TY1B-JR1P47098 CSF1YLR087C 8877 nt2.27□□□□□ -2.05
TY1B-JR1P47098 SDP1YIL113W 630 nt2.27□□□□□ -2.05
TY1B-JR1P47098 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY1B-JR1P47098 TMA64YDR117C 1698 nt2.27□□□□□ -2.05
TY1B-JR1P47098 RIM13YMR154C 2184 nt2.27□□□□□ -2.05
TY1B-JR1P47098 YOR192C-BYOR192C-B 5313 nt2.26□□□□□ -2.05
TY1B-JR1P47098 FIN1YDR130C 876 nt2.26□□□□□ -2.05
TY1B-JR1P47098 HHF2YNL030W 312 nt2.26□□□□□ -2.05
TY1B-JR1P47098 YHR095WYHR095W 495 nt2.25□□□□□ -2.05
TY1B-JR1P47098 NNT1YLR285W 786 nt2.25□□□□□ -2.05
TY1B-JR1P47098 YLR462WYLR462W 609 nt2.25□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms