RNA–Protein interactions for RNA: YKL002W

DID4, Transcript of Class E Vps protein of the ESCRT-III complex, yeastyeast

Gene DID4, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DID4YKL002W MTC1P47018 478 aaKnown RBP14.8□□□□□ -0.04
DID4YKL002W DRS1P32892 752 aaKnown RBP14.32□□□□□ -0.12
DID4YKL002W FAP1P53971 965 aa13.76□□□□□ -0.21
DID4YKL002W PRY3P47033 881 aa12.96□□□□□ -0.33
DID4YKL002W PRI1P10363 409 aa12.72□□□□□ -0.37
DID4YKL002W AAD16Q02895 342 aa12.69□□□□□ -0.38
DID4YKL002W BFR2Q06631 534 aaKnown RBP12.42□□□□□ -0.42
DID4YKL002W ISW2Q08773 1120 aa12.34□□□□□ -0.43
DID4YKL002W YCK3P39962 524 aa12.3□□□□□ -0.44
DID4YKL002W RPG1P38249 964 aaKnown RBP12.23□□□□□ -0.45
DID4YKL002W DIP2Q12220 943 aaPredicted RBP12.17□□□□□ -0.46
DID4YKL002W HAA1Q12753 694 aaKnown RBP12.14□□□□□ -0.47
DID4YKL002W AVT3P36062 692 aa12□□□□□ -0.49
DID4YKL002W TSR3Q12094 313 aaKnown RBP11.99□□□□□ -0.49
DID4YKL002W TFA1P36100 482 aa11.69□□□□□ -0.54
DID4YKL002W RSE1Q04693 1361 aaKnown RBP11.61□□□□□ -0.55
DID4YKL002W MRPL32P25348 183 aa11.51□□□□□ -0.57
DID4YKL002W RPL17AP05740 184 aaKnown RBP11.27□□□□□ -0.61
DID4YKL002W RPL17BP46990 184 aaKnown RBP11.27□□□□□ -0.61
DID4YKL002W REB1P21538 810 aa11.24□□□□□ -0.61
DID4YKL002W YGL015CP33199 130 aa11.16□□□□□ -0.62
DID4YKL002W CDC27P38042 758 aa10.9□□□□□ -0.66
DID4YKL002W SPT21P35209 758 aa10.8□□□□□ -0.68
DID4YKL002W YKR023WP36119 530 aaKnown RBP10.77□□□□□ -0.69
DID4YKL002W UBP10P53874 792 aaPredicted RBP10.63□□□□□ -0.71
DID4YKL002W MAP2P38174 421 aaKnown RBP10.59□□□□□ -0.71
DID4YKL002W TFC8Q12308 588 aa10.53□□□□□ -0.72
DID4YKL002W HOP09932 586 aa10.52□□□□□ -0.73
DID4YKL002W RIM101P33400 625 aa10.5□□□□□ -0.73
DID4YKL002W DCD1P06773 312 aa10.49□□□□□ -0.73
DID4YKL002W BUD31P25337 157 aaPredicted RBP10.43□□□□□ -0.74
DID4YKL002W SCY1P53009 804 aa10.29□□□□□ -0.76
DID4YKL002W PTP3P40048 928 aa10.19□□□□□ -0.78
DID4YKL002W SLX5P32828 619 aaKnown RBP10.18□□□□□ -0.78
DID4YKL002W BCH2P36122 765 aa10.17□□□□□ -0.78
DID4YKL002W OXP1P28273 1286 aa10.16□□□□□ -0.78
DID4YKL002W TIF4632P39936 914 aaKnown RBP10.16□□□□□ -0.78
DID4YKL002W TGL3P40308 642 aa10.15□□□□□ -0.78
DID4YKL002W YIL055CP40523 627 aaKnown RBP10.08□□□□□ -0.8
DID4YKL002W SSP1P38871 571 aa10.07□□□□□ -0.8
DID4YKL002W YAH1Q12184 172 aaKnown RBP10.05□□□□□ -0.8
DID4YKL002W RQC2Q12532 1038 aaKnown RBP10.04□□□□□ -0.8
DID4YKL002W UBP9P39967 754 aa9.94□□□□□ -0.82
DID4YKL002W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
DID4YKL002W YLR271WQ06152 274 aa9.9□□□□□ -0.82
DID4YKL002W EPS1P40557 701 aa9.89□□□□□ -0.83
DID4YKL002W RSM7P47150 247 aa9.89□□□□□ -0.83
DID4YKL002W SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
DID4YKL002W BDF1P35817 686 aa9.86□□□□□ -0.83
DID4YKL002W AI2P03876 854 aa9.71□□□□□ -0.86
DID4YKL002W MGA2P40578 1113 aa9.71□□□□□ -0.86
DID4YKL002W MST1P07236 462 aa9.7□□□□□ -0.86
DID4YKL002W DMA1P38823 416 aa9.68□□□□□ -0.86
DID4YKL002W BBC1P47068 1157 aa9.67□□□□□ -0.86
DID4YKL002W YOR238WQ08634 303 aa9.62□□□□□ -0.87
DID4YKL002W PSD2P53037 1138 aaKnown RBP9.61□□□□□ -0.87
DID4YKL002W NSR1P27476 414 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87 RIP-Chip
DID4YKL002W CST9Q06032 482 aa9.6□□□□□ -0.87
DID4YKL002W YBL029C-AQ3E756 94 aa9.59□□□□□ -0.87
DID4YKL002W YAP5P40574 245 aa9.49□□□□□ -0.89
DID4YKL002W VNX1P42839 908 aa9.47□□□□□ -0.89
DID4YKL002W MRM1P25270 412 aa9.42□□□□□ -0.9
DID4YKL002W SPP1Q03012 353 aa9.37□□□□□ -0.91
DID4YKL002W WSC3Q12215 556 aa9.37□□□□□ -0.91
DID4YKL002W RTG3P38165 486 aa9.31□□□□□ -0.92
DID4YKL002W GTT3P39996 337 aa9.28□□□□□ -0.92
DID4YKL002W TIF11P38912 153 aaKnown RBP9.27□□□□□ -0.93
DID4YKL002W RAM2P29703 316 aa9.25□□□□□ -0.93
DID4YKL002W RCR1P38212 213 aa9.25□□□□□ -0.93
DID4YKL002W AIR2Q12476 344 aaKnown RBP9.23□□□□□ -0.93
DID4YKL002W FKH1P40466 484 aa9.22□□□□□ -0.93
DID4YKL002W PIB1Q06651 286 aa9.21□□□□□ -0.94
DID4YKL002W VPS29P38759 282 aa9.17□□□□□ -0.94
DID4YKL002W ULI1P43604 169 aa9.13□□□□□ -0.95
DID4YKL002W IOC2Q12072 812 aa9.13□□□□□ -0.95
DID4YKL002W MAK11P20484 414 aaKnown RBP9.12□□□□□ -0.95
DID4YKL002W LDB19Q12502 818 aa9.12□□□□□ -0.95
DID4YKL002W YJL171CP46992 396 aa9.11□□□□□ -0.95
DID4YKL002W YMR1P47147 688 aaKnown RBP RIP-Chip data9.11□□□□□ -0.95not detected
DID4YKL002W SAS10Q12136 610 aaPredicted RBP9.11□□□□□ -0.95
DID4YKL002W SET1P38827 1080 aaKnown RBP9.1□□□□□ -0.95
DID4YKL002W MSB4Q12317 492 aa9.07□□□□□ -0.96
DID4YKL002W DBP1P24784 617 aaKnown RBP9.05□□□□□ -0.96
DID4YKL002W STS1P38637 319 aa9.03□□□□□ -0.96
DID4YKL002W YFR006WP43590 535 aa9.03□□□□□ -0.96
DID4YKL002W YOL036WQ08206 761 aa9.02□□□□□ -0.97
DID4YKL002W EAP1P36041 632 aaKnown RBP9.01□□□□□ -0.97
DID4YKL002W COQ8P27697 501 aa8.99□□□□□ -0.97
DID4YKL002W SET4P42948 560 aa8.99□□□□□ -0.97
DID4YKL002W BMT6Q12291 365 aa8.99□□□□□ -0.97
DID4YKL002W MIF2P35201 549 aa8.98□□□□□ -0.97
DID4YKL002W IFH1P39520 1085 aa8.98□□□□□ -0.97
DID4YKL002W TRP5P00931 707 aaKnown RBP8.95□□□□□ -0.98
DID4YKL002W VMA1P17255 1071 aaKnown RBP8.95□□□□□ -0.98
DID4YKL002W RTG1P32607 177 aa8.94□□□□□ -0.98
DID4YKL002W VPS70P47161 811 aa8.93□□□□□ -0.98
DID4YKL002W YPR148CQ06523 435 aa8.93□□□□□ -0.98
DID4YKL002W SAM3Q08986 587 aa8.92□□□□□ -0.98
DID4YKL002W NOP53Q12080 455 aaKnown RBP8.92□□□□□ -0.98
DID4YKL002W EDS1P38073 919 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms