RNA–Protein interactions for RNA: YGR229C

SMI1, Transcript of Protein involved in the regulation of cell wall synthesis, yeastyeast

Gene SMI1, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMI1YGR229C MTC1P47018 478 aaKnown RBP9.46□□□□□ -0.9
SMI1YGR229C DRS1P32892 752 aaKnown RBP8.81□□□□□ -1
SMI1YGR229C FAP1P53971 965 aa8.76□□□□□ -1.01
SMI1YGR229C PRY3P47033 881 aa8.22□□□□□ -1.09
SMI1YGR229C PRI1P10363 409 aa8.06□□□□□ -1.12
SMI1YGR229C AAD16Q02895 342 aa8.05□□□□□ -1.12
SMI1YGR229C ISW2Q08773 1120 aa7.93□□□□□ -1.14
SMI1YGR229C RPG1P38249 964 aaKnown RBP7.82□□□□□ -1.16
SMI1YGR229C HAA1Q12753 694 aaKnown RBP7.7□□□□□ -1.18
SMI1YGR229C DIP2Q12220 943 aaPredicted RBP7.67□□□□□ -1.18
SMI1YGR229C YCK3P39962 524 aa7.63□□□□□ -1.19
SMI1YGR229C TSR3Q12094 313 aaKnown RBP7.62□□□□□ -1.19
SMI1YGR229C BFR2Q06631 534 aaKnown RBP7.56□□□□□ -1.2
SMI1YGR229C RSE1Q04693 1361 aaKnown RBP7.47□□□□□ -1.21
SMI1YGR229C AVT3P36062 692 aa7.41□□□□□ -1.22
SMI1YGR229C MRPL32P25348 183 aa7.36□□□□□ -1.23
SMI1YGR229C REB1P21538 810 aa7.27□□□□□ -1.25
SMI1YGR229C RPL17AP05740 184 aaKnown RBP7.25□□□□□ -1.25
SMI1YGR229C RPL17BP46990 184 aaKnown RBP7.25□□□□□ -1.25
SMI1YGR229C YGL015CP33199 130 aa7.1□□□□□ -1.27
SMI1YGR229C TFA1P36100 482 aa7.04□□□□□ -1.28
SMI1YGR229C CDC27P38042 758 aa6.9□□□□□ -1.31
SMI1YGR229C SPT21P35209 758 aa6.86□□□□□ -1.31
SMI1YGR229C YKR023WP36119 530 aaKnown RBP6.83□□□□□ -1.32
SMI1YGR229C UBP10P53874 792 aaPredicted RBP6.77□□□□□ -1.33
SMI1YGR229C HOP09932 586 aa6.72□□□□□ -1.33
SMI1YGR229C MAP2P38174 421 aaKnown RBP6.72□□□□□ -1.33
SMI1YGR229C RQC2Q12532 1038 aaKnown RBP6.72□□□□□ -1.33
SMI1YGR229C TFC8Q12308 588 aa6.71□□□□□ -1.34
SMI1YGR229C DCD1P06773 312 aa6.69□□□□□ -1.34
SMI1YGR229C TAF7Q05021 590 aa6.66□□□□□ -1.34
SMI1YGR229C RIM101P33400 625 aa6.6□□□□□ -1.35
SMI1YGR229C SCY1P53009 804 aa6.57□□□□□ -1.36
SMI1YGR229C BUD31P25337 157 aaPredicted RBP6.55□□□□□ -1.36
SMI1YGR229C TIF4632P39936 914 aaKnown RBP6.54□□□□□ -1.36
SMI1YGR229C SLX5P32828 619 aaKnown RBP6.52□□□□□ -1.37
SMI1YGR229C BCH2P36122 765 aa6.48□□□□□ -1.37
SMI1YGR229C TGL3P40308 642 aa6.46□□□□□ -1.37
SMI1YGR229C OXP1P28273 1286 aa6.36□□□□□ -1.39
SMI1YGR229C UBP9P39967 754 aa6.36□□□□□ -1.39
SMI1YGR229C PTP3P40048 928 aa6.35□□□□□ -1.39
SMI1YGR229C YIL055CP40523 627 aaKnown RBP6.35□□□□□ -1.39
SMI1YGR229C EPS1P40557 701 aa6.33□□□□□ -1.4
SMI1YGR229C BDF1P35817 686 aa6.3□□□□□ -1.4
SMI1YGR229C SIS1P25294 352 aaKnown RBP6.26□□□□□ -1.41
SMI1YGR229C BBC1P47068 1157 aa6.24□□□□□ -1.41
SMI1YGR229C RSM7P47150 247 aa6.21□□□□□ -1.42
SMI1YGR229C YAH1Q12184 172 aaKnown RBP6.21□□□□□ -1.42
SMI1YGR229C DMA1P38823 416 aa6.19□□□□□ -1.42
SMI1YGR229C AI2P03876 854 aa6.17□□□□□ -1.42
SMI1YGR229C SSP1P38871 571 aa6.17□□□□□ -1.42
SMI1YGR229C YOR238WQ08634 303 aa6.16□□□□□ -1.42
SMI1YGR229C MST1P07236 462 aa6.14□□□□□ -1.43
SMI1YGR229C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SMI1YGR229C NSR1P27476 414 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SMI1YGR229C YAP5P40574 245 aa6.1□□□□□ -1.43
SMI1YGR229C YLR271WQ06152 274 aa6.1□□□□□ -1.43
SMI1YGR229C YBL029C-AQ3E756 94 aa6.09□□□□□ -1.43
SMI1YGR229C LEO1P38439 464 aa6.06□□□□□ -1.44
SMI1YGR229C VNX1P42839 908 aa6.02□□□□□ -1.45
SMI1YGR229C GTT3P39996 337 aa6□□□□□ -1.45
SMI1YGR229C SPP1Q03012 353 aa6□□□□□ -1.45
SMI1YGR229C WSC3Q12215 556 aa6□□□□□ -1.45
SMI1YGR229C PSD2P53037 1138 aaKnown RBP5.99□□□□□ -1.45
SMI1YGR229C MGA2P40578 1113 aa5.98□□□□□ -1.45
SMI1YGR229C MRM1P25270 412 aa5.94□□□□□ -1.46
SMI1YGR229C TIF11P38912 153 aaKnown RBP5.92□□□□□ -1.46
SMI1YGR229C PIB1Q06651 286 aa5.91□□□□□ -1.46
SMI1YGR229C CST9Q06032 482 aa5.9□□□□□ -1.46
SMI1YGR229C YJL171CP46992 396 aa5.86□□□□□ -1.47
SMI1YGR229C ULI1P43604 169 aa5.84□□□□□ -1.47
SMI1YGR229C FKH1P40466 484 aa5.84□□□□□ -1.48
SMI1YGR229C RTG3P38165 486 aa5.83□□□□□ -1.48
SMI1YGR229C YMR1P47147 688 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SMI1YGR229C AIR2Q12476 344 aaKnown RBP5.83□□□□□ -1.48
SMI1YGR229C LDB19Q12502 818 aa5.83□□□□□ -1.48
SMI1YGR229C MSB4Q12317 492 aa5.82□□□□□ -1.48
SMI1YGR229C EAP1P36041 632 aaKnown RBP5.81□□□□□ -1.48
SMI1YGR229C DBP1P24784 617 aaKnown RBP5.79□□□□□ -1.48
SMI1YGR229C IOC2Q12072 812 aa5.79□□□□□ -1.48
SMI1YGR229C VPS29P38759 282 aa5.78□□□□□ -1.48
SMI1YGR229C SET4P42948 560 aa5.77□□□□□ -1.49
SMI1YGR229C YFR006WP43590 535 aa5.77□□□□□ -1.49
SMI1YGR229C YOL036WQ08206 761 aa5.77□□□□□ -1.49
SMI1YGR229C BMT6Q12291 365 aa5.75□□□□□ -1.49
SMI1YGR229C VMA1P17255 1071 aaKnown RBP5.74□□□□□ -1.49
SMI1YGR229C TRP5P00931 707 aaKnown RBP5.73□□□□□ -1.49
SMI1YGR229C STS1P38637 319 aa5.73□□□□□ -1.49
SMI1YGR229C RTG1P32607 177 aa5.72□□□□□ -1.49
SMI1YGR229C RCR1P38212 213 aa5.7□□□□□ -1.5
SMI1YGR229C SAM3Q08986 587 aa5.69□□□□□ -1.5
SMI1YGR229C NCR1Q12200 1170 aa5.69□□□□□ -1.5
SMI1YGR229C YNL035CP53962 389 aaKnown RBP5.69□□□□□ -1.5
SMI1YGR229C RAM2P29703 316 aa5.67□□□□□ -1.5
SMI1YGR229C SEC61P32915 480 aa5.67□□□□□ -1.5
SMI1YGR229C ABP1P15891 592 aaKnown RBP5.66□□□□□ -1.5
SMI1YGR229C TFG1P41895 735 aaPredicted RBP5.66□□□□□ -1.5
SMI1YGR229C DMA2P53924 522 aa5.64□□□□□ -1.51
SMI1YGR229C GYP5Q12344 894 aa5.64□□□□□ -1.51
SMI1YGR229C MAK11P20484 414 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms