RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeastyeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM13YMR154C DRS1P32892 752 aaKnown RBP9.63□□□□□ -0.87
RIM13YMR154C MTC1P47018 478 aaKnown RBP9.45□□□□□ -0.9
RIM13YMR154C BFR2Q06631 534 aaKnown RBP8.35□□□□□ -1.07
RIM13YMR154C DIP2Q12220 943 aaPredicted RBP8.15□□□□□ -1.11
RIM13YMR154C AVT3P36062 692 aa8.09□□□□□ -1.11
RIM13YMR154C TFA1P36100 482 aa7.9□□□□□ -1.15
RIM13YMR154C FAP1P53971 965 aa7.87□□□□□ -1.15
RIM13YMR154C RSE1Q04693 1361 aaKnown RBP7.6□□□□□ -1.19
RIM13YMR154C ISW2Q08773 1120 aa7.6□□□□□ -1.19
RIM13YMR154C RPG1P38249 964 aaKnown RBP7.58□□□□□ -1.2
RIM13YMR154C PRI1P10363 409 aa7.54□□□□□ -1.2
RIM13YMR154C PRY3P47033 881 aa7.47□□□□□ -1.21
RIM13YMR154C RPL17AP05740 184 aaKnown RBP7.37□□□□□ -1.23
RIM13YMR154C RPL17BP46990 184 aaKnown RBP7.37□□□□□ -1.23
RIM13YMR154C AAD16Q02895 342 aa7.35□□□□□ -1.23
RIM13YMR154C REB1P21538 810 aa7.23□□□□□ -1.25
RIM13YMR154C TSR3Q12094 313 aaKnown RBP7.21□□□□□ -1.26
RIM13YMR154C SPT21P35209 758 aa7.13□□□□□ -1.27
RIM13YMR154C RIM101P33400 625 aa7.02□□□□□ -1.29
RIM13YMR154C HAA1Q12753 694 aaKnown RBP6.91□□□□□ -1.3
RIM13YMR154C PTP3P40048 928 aa6.91□□□□□ -1.3
RIM13YMR154C YCK3P39962 524 aa6.9□□□□□ -1.3
RIM13YMR154C YKR023WP36119 530 aaKnown RBP6.89□□□□□ -1.31
RIM13YMR154C OXP1P28273 1286 aa6.86□□□□□ -1.31
RIM13YMR154C MRPL32P25348 183 aa6.82□□□□□ -1.32
RIM13YMR154C DCD1P06773 312 aa6.79□□□□□ -1.32
RIM13YMR154C HOP09932 586 aa6.78□□□□□ -1.32
RIM13YMR154C YAH1Q12184 172 aaKnown RBP6.77□□□□□ -1.33
RIM13YMR154C CDC27P38042 758 aa6.74□□□□□ -1.33
RIM13YMR154C SSP1P38871 571 aa6.74□□□□□ -1.33
RIM13YMR154C TFC8Q12308 588 aa6.72□□□□□ -1.33
RIM13YMR154C YLR271WQ06152 274 aa6.68□□□□□ -1.34
RIM13YMR154C YIL055CP40523 627 aaKnown RBP6.66□□□□□ -1.34
RIM13YMR154C RQC2Q12532 1038 aaKnown RBP6.62□□□□□ -1.35
RIM13YMR154C DMA1P38823 416 aa6.61□□□□□ -1.35
RIM13YMR154C RSM7P47150 247 aa6.58□□□□□ -1.36
RIM13YMR154C BCH2P36122 765 aa6.55□□□□□ -1.36
RIM13YMR154C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RIM13YMR154C CST9Q06032 482 aa6.52□□□□□ -1.36
RIM13YMR154C AI2P03876 854 aa6.49□□□□□ -1.37
RIM13YMR154C MGA2P40578 1113 aa6.47□□□□□ -1.37
RIM13YMR154C PSD2P53037 1138 aaKnown RBP6.47□□□□□ -1.37
RIM13YMR154C BUD31P25337 157 aaPredicted RBP6.45□□□□□ -1.38
RIM13YMR154C EPS1P40557 701 aa6.43□□□□□ -1.38
RIM13YMR154C MAP2P38174 421 aaKnown RBP6.42□□□□□ -1.38
RIM13YMR154C SCY1P53009 804 aa6.41□□□□□ -1.38
RIM13YMR154C BDF1P35817 686 aa6.39□□□□□ -1.39
RIM13YMR154C BBC1P47068 1157 aa6.36□□□□□ -1.39
RIM13YMR154C MRM1P25270 412 aa6.32□□□□□ -1.4
RIM13YMR154C RCR1P38212 213 aa6.32□□□□□ -1.4
RIM13YMR154C UBP10P53874 792 aaPredicted RBP6.31□□□□□ -1.4
RIM13YMR154C YGL015CP33199 130 aa6.29□□□□□ -1.4
RIM13YMR154C RAM2P29703 316 aa6.25□□□□□ -1.41
RIM13YMR154C SLX5P32828 619 aaKnown RBP6.22□□□□□ -1.41
RIM13YMR154C RTG3P38165 486 aa6.17□□□□□ -1.42
RIM13YMR154C VPS29P38759 282 aa6.16□□□□□ -1.42
RIM13YMR154C SAS10Q12136 610 aaPredicted RBP6.16□□□□□ -1.42
RIM13YMR154C STS1P38637 319 aa6.1□□□□□ -1.43
RIM13YMR154C SET1P38827 1080 aaKnown RBP6.1□□□□□ -1.43
RIM13YMR154C MAK11P20484 414 aaKnown RBP6.08□□□□□ -1.44
RIM13YMR154C YFR006WP43590 535 aa6.08□□□□□ -1.44
RIM13YMR154C PIB1Q06651 286 aa6.06□□□□□ -1.44
RIM13YMR154C DBP1P24784 617 aaKnown RBP6.04□□□□□ -1.44
RIM13YMR154C YMR1P47147 688 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
RIM13YMR154C COQ8P27697 501 aa6.02□□□□□ -1.45
RIM13YMR154C EDS1P38073 919 aa6.01□□□□□ -1.45
RIM13YMR154C TIF4632P39936 914 aaKnown RBP6.01□□□□□ -1.45
RIM13YMR154C YOR238WQ08634 303 aa6.01□□□□□ -1.45
RIM13YMR154C VPS70P47161 811 aa6□□□□□ -1.45
RIM13YMR154C MIF2P35201 549 aa5.99□□□□□ -1.45
RIM13YMR154C YPR148CQ06523 435 aa5.99□□□□□ -1.45
RIM13YMR154C SIS1P25294 352 aaKnown RBP5.99□□□□□ -1.45
RIM13YMR154C TGL3P40308 642 aa5.99□□□□□ -1.45
RIM13YMR154C LEO1P38439 464 aa5.95□□□□□ -1.46
RIM13YMR154C NSR1P27476 414 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46 RIP-Chip
RIM13YMR154C YAP5P40574 245 aa5.94□□□□□ -1.46
RIM13YMR154C LEU3P08638 886 aa5.94□□□□□ -1.46
RIM13YMR154C VMA1P17255 1071 aaKnown RBP5.9□□□□□ -1.46
RIM13YMR154C PTC3P34221 468 aaKnown RBP5.9□□□□□ -1.46
RIM13YMR154C SPB4P25808 606 aaPredicted RBP5.88□□□□□ -1.47
RIM13YMR154C IFH1P39520 1085 aa5.87□□□□□ -1.47
RIM13YMR154C MST1P07236 462 aa5.85□□□□□ -1.47
RIM13YMR154C CKB1P43639 278 aa5.85□□□□□ -1.47
RIM13YMR154C PBS2P08018 668 aa5.84□□□□□ -1.47
RIM13YMR154C NOP53Q12080 455 aaKnown RBP5.82□□□□□ -1.48
RIM13YMR154C DSF2P38213 736 aa5.82□□□□□ -1.48
RIM13YMR154C TAF7Q05021 590 aa5.81□□□□□ -1.48
RIM13YMR154C SAM3Q08986 587 aa5.79□□□□□ -1.48
RIM13YMR154C REF2P42073 533 aaPredicted RBP5.79□□□□□ -1.48
RIM13YMR154C GRE2Q12068 342 aaKnown RBP5.79□□□□□ -1.48
RIM13YMR154C SOL3P38858 249 aa5.78□□□□□ -1.48
RIM13YMR154C VHR2P40041 505 aa5.78□□□□□ -1.48
RIM13YMR154C ATH1P48016 1211 aa5.78□□□□□ -1.48
RIM13YMR154C GTT3P39996 337 aa5.77□□□□□ -1.49
RIM13YMR154C SET4P42948 560 aa5.77□□□□□ -1.49
RIM13YMR154C YOL036WQ08206 761 aa5.77□□□□□ -1.49
RIM13YMR154C GYP5Q12344 894 aa5.76□□□□□ -1.49
RIM13YMR154C UBP14P38237 781 aaKnown RBP5.76□□□□□ -1.49
RIM13YMR154C IES2P40154 320 aa5.76□□□□□ -1.49
RIM13YMR154C YDR090CQ03193 310 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms