RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeastyeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB17YDL146W MTC1P47018 478 aaKnown RBP15.94■□□□□ 0.14
LDB17YDL146W DRS1P32892 752 aaKnown RBP15.2■□□□□ 0.02
LDB17YDL146W FAP1P53971 965 aa14.1□□□□□ -0.15
LDB17YDL146W PRI1P10363 409 aa13.28□□□□□ -0.28
LDB17YDL146W DIP2Q12220 943 aaPredicted RBP13.22□□□□□ -0.29
LDB17YDL146W PRY3P47033 881 aa13.21□□□□□ -0.3
LDB17YDL146W AAD16Q02895 342 aa13.18□□□□□ -0.3
LDB17YDL146W ISW2Q08773 1120 aa13.18□□□□□ -0.3
LDB17YDL146W RPG1P38249 964 aaKnown RBP13.03□□□□□ -0.32
LDB17YDL146W AVT3P36062 692 aa12.78□□□□□ -0.36
LDB17YDL146W BFR2Q06631 534 aaKnown RBP12.77□□□□□ -0.37
LDB17YDL146W RSE1Q04693 1361 aaKnown RBP12.7□□□□□ -0.38
LDB17YDL146W TSR3Q12094 313 aaKnown RBP12.59□□□□□ -0.39
LDB17YDL146W YCK3P39962 524 aa12.4□□□□□ -0.42
LDB17YDL146W HAA1Q12753 694 aaKnown RBP12.4□□□□□ -0.43
LDB17YDL146W RPL17AP05740 184 aaKnown RBP12.27□□□□□ -0.44
LDB17YDL146W RPL17BP46990 184 aaKnown RBP12.27□□□□□ -0.44
LDB17YDL146W REB1P21538 810 aa12.22□□□□□ -0.45
LDB17YDL146W MRPL32P25348 183 aa12.11□□□□□ -0.47
LDB17YDL146W SPT21P35209 758 aa11.73□□□□□ -0.53
LDB17YDL146W YKR023WP36119 530 aaKnown RBP11.55□□□□□ -0.56
LDB17YDL146W YGL015CP33199 130 aa11.52□□□□□ -0.56
LDB17YDL146W CDC27P38042 758 aa11.51□□□□□ -0.57
LDB17YDL146W RIM101P33400 625 aa11.39□□□□□ -0.59
LDB17YDL146W TFA1P36100 482 aa11.39□□□□□ -0.59
LDB17YDL146W HOP09932 586 aa11.34□□□□□ -0.59
LDB17YDL146W TFC8Q12308 588 aa11.32□□□□□ -0.6
LDB17YDL146W DCD1P06773 312 aa11.28□□□□□ -0.6
LDB17YDL146W UBP10P53874 792 aaPredicted RBP11.16□□□□□ -0.62
LDB17YDL146W MAP2P38174 421 aaKnown RBP11.13□□□□□ -0.63
LDB17YDL146W OXP1P28273 1286 aa11.01□□□□□ -0.65
LDB17YDL146W SCY1P53009 804 aa10.98□□□□□ -0.65
LDB17YDL146W BCH2P36122 765 aa10.97□□□□□ -0.65
LDB17YDL146W YIL055CP40523 627 aaKnown RBP10.91□□□□□ -0.66
LDB17YDL146W PTP3P40048 928 aa10.89□□□□□ -0.67
LDB17YDL146W SLX5P32828 619 aaKnown RBP10.82□□□□□ -0.68
LDB17YDL146W YAH1Q12184 172 aaKnown RBP10.78□□□□□ -0.68
LDB17YDL146W TIF4632P39936 914 aaKnown RBP10.74□□□□□ -0.69
LDB17YDL146W EPS1P40557 701 aa10.72□□□□□ -0.69
LDB17YDL146W RSM7P47150 247 aa10.72□□□□□ -0.69
LDB17YDL146W BDF1P35817 686 aa10.67□□□□□ -0.7
LDB17YDL146W TGL3P40308 642 aa10.65□□□□□ -0.7
LDB17YDL146W BBC1P47068 1157 aa10.61□□□□□ -0.71
LDB17YDL146W AI2P03876 854 aa10.6□□□□□ -0.71
LDB17YDL146W YLR271WQ06152 274 aa10.58□□□□□ -0.72
LDB17YDL146W SSP1P38871 571 aa10.52□□□□□ -0.73
LDB17YDL146W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.46□□□□□ -0.74 RIP-Chip
LDB17YDL146W BUD31P25337 157 aaPredicted RBP10.42□□□□□ -0.74
LDB17YDL146W PSD2P53037 1138 aaKnown RBP10.38□□□□□ -0.75
LDB17YDL146W UBP9P39967 754 aa10.28□□□□□ -0.76
LDB17YDL146W MGA2P40578 1113 aa10.25□□□□□ -0.77
LDB17YDL146W MRM1P25270 412 aa10.24□□□□□ -0.77
LDB17YDL146W NSR1P27476 414 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77not detected
LDB17YDL146W YOR238WQ08634 303 aa10.24□□□□□ -0.77
LDB17YDL146W YAP5P40574 245 aa10.22□□□□□ -0.77
LDB17YDL146W CST9Q06032 482 aa10.22□□□□□ -0.77
LDB17YDL146W MST1P07236 462 aa10.21□□□□□ -0.78
LDB17YDL146W YBL029C-AQ3E756 94 aa10.04□□□□□ -0.8
LDB17YDL146W RTG3P38165 486 aa10.04□□□□□ -0.8
LDB17YDL146W PIB1Q06651 286 aa10.03□□□□□ -0.8
LDB17YDL146W GTT3P39996 337 aa10□□□□□ -0.81
LDB17YDL146W SIS1P25294 352 aaKnown RBP9.98□□□□□ -0.81
LDB17YDL146W VPS29P38759 282 aa9.98□□□□□ -0.81
LDB17YDL146W YMR1P47147 688 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
LDB17YDL146W WSC3Q12215 556 aa9.97□□□□□ -0.81
LDB17YDL146W RCR1P38212 213 aa9.95□□□□□ -0.82
LDB17YDL146W VNX1P42839 908 aa9.94□□□□□ -0.82
LDB17YDL146W DBP1P24784 617 aaKnown RBP9.92□□□□□ -0.82
LDB17YDL146W YFR006WP43590 535 aa9.9□□□□□ -0.83
LDB17YDL146W SPP1Q03012 353 aa9.88□□□□□ -0.83
LDB17YDL146W STS1P38637 319 aa9.87□□□□□ -0.83
LDB17YDL146W TIF11P38912 153 aaKnown RBP9.79□□□□□ -0.84
LDB17YDL146W VMA1P17255 1071 aaKnown RBP9.78□□□□□ -0.84
LDB17YDL146W MSB4Q12317 492 aa9.73□□□□□ -0.85
LDB17YDL146W SET4P42948 560 aa9.72□□□□□ -0.85
LDB17YDL146W YOL036WQ08206 761 aa9.72□□□□□ -0.85
LDB17YDL146W RAM2P29703 316 aa9.72□□□□□ -0.85
LDB17YDL146W ULI1P43604 169 aa9.72□□□□□ -0.85
LDB17YDL146W SAM3Q08986 587 aa9.69□□□□□ -0.86
LDB17YDL146W EAP1P36041 632 aaKnown RBP9.68□□□□□ -0.86
LDB17YDL146W MAK11P20484 414 aaKnown RBP9.66□□□□□ -0.86
LDB17YDL146W IOC2Q12072 812 aa9.65□□□□□ -0.87
LDB17YDL146W LDB19Q12502 818 aa9.65□□□□□ -0.87
LDB17YDL146W MIF2P35201 549 aa9.61□□□□□ -0.87
LDB17YDL146W TRP5P00931 707 aaKnown RBP9.6□□□□□ -0.87
LDB17YDL146W GYP5Q12344 894 aa9.6□□□□□ -0.87
LDB17YDL146W FKH1P40466 484 aa9.59□□□□□ -0.87
LDB17YDL146W AIR2Q12476 344 aaKnown RBP9.57□□□□□ -0.88
LDB17YDL146W ABP1P15891 592 aaKnown RBP9.55□□□□□ -0.88
LDB17YDL146W COQ8P27697 501 aa9.53□□□□□ -0.88
LDB17YDL146W DCW1P36091 449 aa9.53□□□□□ -0.88
LDB17YDL146W EDS1P38073 919 aa9.53□□□□□ -0.88
LDB17YDL146W RTG1P32607 177 aa9.52□□□□□ -0.89
LDB17YDL146W YJL171CP46992 396 aa9.52□□□□□ -0.89
LDB17YDL146W HTA1P04911 132 aaKnown RBP9.51□□□□□ -0.89
LDB17YDL146W HTA2P04912 132 aa9.51□□□□□ -0.89
LDB17YDL146W GRE2Q12068 342 aaKnown RBP9.51□□□□□ -0.89
LDB17YDL146W PTC3P34221 468 aaKnown RBP9.5□□□□□ -0.89
LDB17YDL146W YNL035CP53962 389 aaKnown RBP9.49□□□□□ -0.89
LDB17YDL146W ATH1P48016 1211 aa9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms