RNA–Protein interactions for RNA: YDR401W

YDR401W, Transcript of Dubious open reading frame, yeastyeast

Gene YDR401W, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR401WYDR401W MTC1P47018 478 aaKnown RBP15.93■□□□□ 0.14
YDR401WYDR401W DRS1P32892 752 aaKnown RBP15.21■□□□□ 0.03
YDR401WYDR401W FAP1P53971 965 aa13.99□□□□□ -0.17
YDR401WYDR401W BFR2Q06631 534 aaKnown RBP13.61□□□□□ -0.23
YDR401WYDR401W TFA1P36100 482 aa13.53□□□□□ -0.24
YDR401WYDR401W PRI1P10363 409 aa13.26□□□□□ -0.29
YDR401WYDR401W DIP2Q12220 943 aaPredicted RBP13.22□□□□□ -0.29
YDR401WYDR401W PRY3P47033 881 aa13.14□□□□□ -0.31
YDR401WYDR401W AAD16Q02895 342 aa13.12□□□□□ -0.31
YDR401WYDR401W ISW2Q08773 1120 aa13.12□□□□□ -0.31
YDR401WYDR401W RPG1P38249 964 aaKnown RBP13□□□□□ -0.33
YDR401WYDR401W AVT3P36062 692 aa12.83□□□□□ -0.36
YDR401WYDR401W RQC2Q12532 1038 aaKnown RBP12.68□□□□□ -0.38
YDR401WYDR401W RSE1Q04693 1361 aaKnown RBP12.68□□□□□ -0.38
YDR401WYDR401W TSR3Q12094 313 aaKnown RBP12.57□□□□□ -0.4
YDR401WYDR401W YCK3P39962 524 aa12.46□□□□□ -0.41
YDR401WYDR401W HAA1Q12753 694 aaKnown RBP12.31□□□□□ -0.44
YDR401WYDR401W RPL17AP05740 184 aaKnown RBP12.27□□□□□ -0.45
YDR401WYDR401W RPL17BP46990 184 aaKnown RBP12.27□□□□□ -0.45
YDR401WYDR401W REB1P21538 810 aa12.17□□□□□ -0.46
YDR401WYDR401W MRPL32P25348 183 aa12.04□□□□□ -0.48
YDR401WYDR401W TAF7Q05021 590 aa11.8□□□□□ -0.52
YDR401WYDR401W SPT21P35209 758 aa11.77□□□□□ -0.53
YDR401WYDR401W DMA1P38823 416 aa11.67□□□□□ -0.54
YDR401WYDR401W YKR023WP36119 530 aaKnown RBP11.58□□□□□ -0.56
YDR401WYDR401W CDC27P38042 758 aa11.54□□□□□ -0.56
YDR401WYDR401W YGL015CP33199 130 aa11.44□□□□□ -0.58
YDR401WYDR401W RIM101P33400 625 aa11.42□□□□□ -0.58
YDR401WYDR401W HOP09932 586 aa11.35□□□□□ -0.59
YDR401WYDR401W TFC8Q12308 588 aa11.33□□□□□ -0.6
YDR401WYDR401W DCD1P06773 312 aa11.31□□□□□ -0.6
YDR401WYDR401W PTP3P40048 928 aa11.18□□□□□ -0.62
YDR401WYDR401W LEO1P38439 464 aa11.15□□□□□ -0.62
YDR401WYDR401W MAP2P38174 421 aaKnown RBP11.13□□□□□ -0.63
YDR401WYDR401W UBP10P53874 792 aaPredicted RBP11.11□□□□□ -0.63
YDR401WYDR401W OXP1P28273 1286 aa11.07□□□□□ -0.64
YDR401WYDR401W BCH2P36122 765 aa10.98□□□□□ -0.65
YDR401WYDR401W SCY1P53009 804 aa10.96□□□□□ -0.65
YDR401WYDR401W YIL055CP40523 627 aaKnown RBP10.87□□□□□ -0.67
YDR401WYDR401W YAH1Q12184 172 aaKnown RBP10.79□□□□□ -0.68
YDR401WYDR401W SLX5P32828 619 aaKnown RBP10.78□□□□□ -0.68
YDR401WYDR401W SSP1P38871 571 aa10.76□□□□□ -0.69
YDR401WYDR401W EPS1P40557 701 aa10.72□□□□□ -0.69
YDR401WYDR401W RSM7P47150 247 aa10.72□□□□□ -0.69
YDR401WYDR401W BDF1P35817 686 aa10.67□□□□□ -0.7
YDR401WYDR401W TIF4632P39936 914 aaKnown RBP10.65□□□□□ -0.7
YDR401WYDR401W LEU3P08638 886 aa10.64□□□□□ -0.71
YDR401WYDR401W YLR271WQ06152 274 aa10.62□□□□□ -0.71
YDR401WYDR401W TGL3P40308 642 aa10.61□□□□□ -0.71
YDR401WYDR401W AI2P03876 854 aa10.6□□□□□ -0.71
YDR401WYDR401W BBC1P47068 1157 aa10.56□□□□□ -0.72
YDR401WYDR401W SAS10Q12136 610 aaPredicted RBP10.55□□□□□ -0.72
YDR401WYDR401W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.47□□□□□ -0.73not detected
YDR401WYDR401W PSD2P53037 1138 aaKnown RBP10.41□□□□□ -0.74
YDR401WYDR401W DMA2P53924 522 aa10.4□□□□□ -0.74
YDR401WYDR401W BUD31P25337 157 aaPredicted RBP10.36□□□□□ -0.75
YDR401WYDR401W RPN1P38764 993 aaKnown RBP10.28□□□□□ -0.76
YDR401WYDR401W CST9Q06032 482 aa10.27□□□□□ -0.77
YDR401WYDR401W MGA2P40578 1113 aa10.25□□□□□ -0.77
YDR401WYDR401W MRM1P25270 412 aa10.24□□□□□ -0.77
YDR401WYDR401W NSR1P27476 414 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
YDR401WYDR401W MST1P07236 462 aa10.2□□□□□ -0.78
YDR401WYDR401W YOR238WQ08634 303 aa10.2□□□□□ -0.78
YDR401WYDR401W UBP9P39967 754 aa10.17□□□□□ -0.78
YDR401WYDR401W YAP5P40574 245 aa10.17□□□□□ -0.78
YDR401WYDR401W ABP1P15891 592 aaKnown RBP10.12□□□□□ -0.79
YDR401WYDR401W RLF2Q12495 606 aa10.1□□□□□ -0.79
YDR401WYDR401W SPB4P25808 606 aaPredicted RBP10.09□□□□□ -0.79
YDR401WYDR401W RTG3P38165 486 aa10.02□□□□□ -0.81
YDR401WYDR401W PIB1Q06651 286 aa10.02□□□□□ -0.81
YDR401WYDR401W YBL029C-AQ3E756 94 aa10.02□□□□□ -0.81
YDR401WYDR401W VPS29P38759 282 aa10.01□□□□□ -0.81
YDR401WYDR401W RCR1P38212 213 aa10□□□□□ -0.81
YDR401WYDR401W CKB1P43639 278 aa9.99□□□□□ -0.81
YDR401WYDR401W VPS70P47161 811 aa9.96□□□□□ -0.82
YDR401WYDR401W YMR1P47147 688 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
YDR401WYDR401W GTT3P39996 337 aa9.93□□□□□ -0.82
YDR401WYDR401W WSC3Q12215 556 aa9.93□□□□□ -0.82
YDR401WYDR401W DBP1P24784 617 aaKnown RBP9.92□□□□□ -0.82
YDR401WYDR401W SET1P38827 1080 aaKnown RBP9.92□□□□□ -0.82
YDR401WYDR401W VNX1P42839 908 aa9.91□□□□□ -0.82
YDR401WYDR401W YFR006WP43590 535 aa9.91□□□□□ -0.82
YDR401WYDR401W STS1P38637 319 aa9.9□□□□□ -0.82
YDR401WYDR401W SIS1P25294 352 aaKnown RBP9.89□□□□□ -0.83
YDR401WYDR401W RAM2P29703 316 aa9.87□□□□□ -0.83
YDR401WYDR401W YPR148CQ06523 435 aa9.84□□□□□ -0.83
YDR401WYDR401W SPP1Q03012 353 aa9.82□□□□□ -0.84
YDR401WYDR401W KIN1P13185 1064 aa9.79□□□□□ -0.84
YDR401WYDR401W VMA1P17255 1071 aaKnown RBP9.78□□□□□ -0.84
YDR401WYDR401W TIF11P38912 153 aaKnown RBP9.76□□□□□ -0.85
YDR401WYDR401W IFH1P39520 1085 aa9.76□□□□□ -0.85
YDR401WYDR401W DSF2P38213 736 aa9.73□□□□□ -0.85
YDR401WYDR401W PBS2P08018 668 aa9.72□□□□□ -0.85
YDR401WYDR401W YOL036WQ08206 761 aa9.72□□□□□ -0.85
YDR401WYDR401W SET4P42948 560 aa9.71□□□□□ -0.86
YDR401WYDR401W YNR021WP53723 404 aaKnown RBP9.7□□□□□ -0.86
YDR401WYDR401W SAM3Q08986 587 aa9.7□□□□□ -0.86
YDR401WYDR401W HGH1P48362 394 aaKnown RBP9.69□□□□□ -0.86
YDR401WYDR401W MSB4Q12317 492 aa9.69□□□□□ -0.86
YDR401WYDR401W ULI1P43604 169 aa9.68□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms