RNA–Protein interactions for RNA: YJL097W

PHS1, Transcript of Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, yeastyeast

Gene PHS1, Length 654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHS1YJL097W FAP1P53971 965 aa12.18□□□□□ -0.46
PHS1YJL097W MTC1P47018 478 aaKnown RBP11.97□□□□□ -0.49
PHS1YJL097W PRY3P47033 881 aa11.51□□□□□ -0.57
PHS1YJL097W YCK3P39962 524 aa10.88□□□□□ -0.67
PHS1YJL097W AAD16Q02895 342 aa10.87□□□□□ -0.67
PHS1YJL097W PRI1P10363 409 aa10.79□□□□□ -0.68
PHS1YJL097W HAA1Q12753 694 aaKnown RBP10.66□□□□□ -0.7
PHS1YJL097W TSR3Q12094 313 aaKnown RBP10.18□□□□□ -0.78
PHS1YJL097W RPG1P38249 964 aaKnown RBP10.16□□□□□ -0.78
PHS1YJL097W ISW2Q08773 1120 aa10.16□□□□□ -0.78
PHS1YJL097W DRS1P32892 752 aaKnown RBP10□□□□□ -0.81
PHS1YJL097W MRPL32P25348 183 aa9.73□□□□□ -0.85
PHS1YJL097W YGL015CP33199 130 aa9.65□□□□□ -0.86
PHS1YJL097W BUD31P25337 157 aaPredicted RBP9.38□□□□□ -0.91
PHS1YJL097W RSE1Q04693 1361 aaKnown RBP9.21□□□□□ -0.94
PHS1YJL097W DIP2Q12220 943 aaPredicted RBP9.2□□□□□ -0.94
PHS1YJL097W REB1P21538 810 aa9.08□□□□□ -0.96
PHS1YJL097W CDC27P38042 758 aa9.08□□□□□ -0.96
PHS1YJL097W RPL17AP05740 184 aaKnown RBP9.03□□□□□ -0.96
PHS1YJL097W RPL17BP46990 184 aaKnown RBP9.03□□□□□ -0.96
PHS1YJL097W MAP2P38174 421 aaKnown RBP8.92□□□□□ -0.98
PHS1YJL097W UBP10P53874 792 aaPredicted RBP8.87□□□□□ -0.99
PHS1YJL097W SIS1P25294 352 aaKnown RBP8.83□□□□□ -1
PHS1YJL097W YKR023WP36119 530 aaKnown RBP8.75□□□□□ -1.01
PHS1YJL097W DCD1P06773 312 aa8.63□□□□□ -1.03
PHS1YJL097W UBP9P39967 754 aa8.61□□□□□ -1.03
PHS1YJL097W HOP09932 586 aa8.6□□□□□ -1.03
PHS1YJL097W TFC8Q12308 588 aa8.55□□□□□ -1.04
PHS1YJL097W SPT21P35209 758 aa8.53□□□□□ -1.04
PHS1YJL097W AVT3P36062 692 aa8.52□□□□□ -1.05
PHS1YJL097W TIF4632P39936 914 aaKnown RBP8.52□□□□□ -1.05
PHS1YJL097W TGL3P40308 642 aa8.52□□□□□ -1.05
PHS1YJL097W SCY1P53009 804 aa8.52□□□□□ -1.05
PHS1YJL097W SLX5P32828 619 aaKnown RBP8.44□□□□□ -1.06
PHS1YJL097W BCH2P36122 765 aa8.24□□□□□ -1.09
PHS1YJL097W YBL029C-AQ3E756 94 aa8.14□□□□□ -1.11
PHS1YJL097W MST1P07236 462 aa8.03□□□□□ -1.12
PHS1YJL097W VNX1P42839 908 aa7.98□□□□□ -1.13
PHS1YJL097W RIM101P33400 625 aa7.97□□□□□ -1.13
PHS1YJL097W BDF1P35817 686 aa7.94□□□□□ -1.14
PHS1YJL097W YOR238WQ08634 303 aa7.94□□□□□ -1.14
PHS1YJL097W EPS1P40557 701 aa7.93□□□□□ -1.14
PHS1YJL097W SPP1Q03012 353 aa7.89□□□□□ -1.15
PHS1YJL097W AIR2Q12476 344 aaKnown RBP7.86□□□□□ -1.15
PHS1YJL097W WSC3Q12215 556 aa7.85□□□□□ -1.15
PHS1YJL097W YJL171CP46992 396 aa7.82□□□□□ -1.16
PHS1YJL097W FKH1P40466 484 aa7.77□□□□□ -1.17
PHS1YJL097W NSR1P27476 414 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
PHS1YJL097W TIF11P38912 153 aaKnown RBP7.72□□□□□ -1.17
PHS1YJL097W BFR2Q06631 534 aaKnown RBP7.71□□□□□ -1.18
PHS1YJL097W OXP1P28273 1286 aa7.7□□□□□ -1.18
PHS1YJL097W YAP5P40574 245 aa7.7□□□□□ -1.18
PHS1YJL097W LDB19Q12502 818 aa7.63□□□□□ -1.19
PHS1YJL097W BMT6Q12291 365 aa7.62□□□□□ -1.19
PHS1YJL097W PTP3P40048 928 aa7.6□□□□□ -1.19
PHS1YJL097W GTT3P39996 337 aa7.57□□□□□ -1.2
PHS1YJL097W ULI1P43604 169 aa7.57□□□□□ -1.2
PHS1YJL097W IOC2Q12072 812 aa7.57□□□□□ -1.2
PHS1YJL097W YIL055CP40523 627 aaKnown RBP7.54□□□□□ -1.2
PHS1YJL097W BBC1P47068 1157 aa7.52□□□□□ -1.21
PHS1YJL097W AI2P03876 854 aa7.49□□□□□ -1.21
PHS1YJL097W PIB1Q06651 286 aa7.47□□□□□ -1.21
PHS1YJL097W RSM7P47150 247 aa7.45□□□□□ -1.22
PHS1YJL097W RTG1P32607 177 aa7.38□□□□□ -1.23
PHS1YJL097W NCR1Q12200 1170 aa7.36□□□□□ -1.23
PHS1YJL097W YAH1Q12184 172 aaKnown RBP7.32□□□□□ -1.24
PHS1YJL097W TRP5P00931 707 aaKnown RBP7.31□□□□□ -1.24
PHS1YJL097W EAP1P36041 632 aaKnown RBP7.3□□□□□ -1.24
PHS1YJL097W MSB4Q12317 492 aa7.3□□□□□ -1.24
PHS1YJL097W SET4P42948 560 aa7.29□□□□□ -1.24
PHS1YJL097W YOL036WQ08206 761 aa7.26□□□□□ -1.25
PHS1YJL097W YNL035CP53962 389 aaKnown RBP7.23□□□□□ -1.25
PHS1YJL097W SEC61P32915 480 aa7.22□□□□□ -1.25
PHS1YJL097W BCK2P33306 851 aa7.2□□□□□ -1.26
PHS1YJL097W MRM1P25270 412 aa7.16□□□□□ -1.26
PHS1YJL097W SAP30P38429 201 aa7.16□□□□□ -1.26
PHS1YJL097W PSD2P53037 1138 aaKnown RBP7.13□□□□□ -1.27
PHS1YJL097W YLR271WQ06152 274 aa7.13□□□□□ -1.27
PHS1YJL097W TFG1P41895 735 aaPredicted RBP7.12□□□□□ -1.27
PHS1YJL097W CHL1P22516 861 aaPredicted RBP7.09□□□□□ -1.27
PHS1YJL097W YFR006WP43590 535 aa7.09□□□□□ -1.27
PHS1YJL097W DBP1P24784 617 aaKnown RBP7.08□□□□□ -1.28
PHS1YJL097W DAN4P47179 1161 aa7.07□□□□□ -1.28
PHS1YJL097W VMA1P17255 1071 aaKnown RBP7.05□□□□□ -1.28
PHS1YJL097W PRE3P38624 215 aa7.04□□□□□ -1.28
PHS1YJL097W YMR1P47147 688 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
PHS1YJL097W VPS29P38759 282 aa7.03□□□□□ -1.28
PHS1YJL097W YDL129WQ07555 291 aa7.03□□□□□ -1.28
PHS1YJL097W RGA2Q06407 1009 aa7.02□□□□□ -1.29
PHS1YJL097W SAM3Q08986 587 aa7.02□□□□□ -1.29
PHS1YJL097W STS1P38637 319 aa6.98□□□□□ -1.29
PHS1YJL097W JIP4Q03361 876 aa6.98□□□□□ -1.29
PHS1YJL097W VRP1P37370 817 aa6.97□□□□□ -1.29
PHS1YJL097W XDJ1P39102 459 aa6.96□□□□□ -1.3
PHS1YJL097W YDR344CQ05510 147 aa6.94□□□□□ -1.3
PHS1YJL097W DPS1P04802 557 aaKnown RBP6.89□□□□□ -1.31
PHS1YJL097W DCW1P36091 449 aa6.89□□□□□ -1.31
PHS1YJL097W RTG3P38165 486 aa6.89□□□□□ -1.31
PHS1YJL097W GYP5Q12344 894 aa6.89□□□□□ -1.31
PHS1YJL097W PTC4P38089 393 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms