RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeastyeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA2YDR295C DRS1P32892 752 aaKnown RBP9.65□□□□□ -0.86
HDA2YDR295C MTC1P47018 478 aaKnown RBP9.39□□□□□ -0.91
HDA2YDR295C BFR2Q06631 534 aaKnown RBP8.44□□□□□ -1.06
HDA2YDR295C AVT3P36062 692 aa8.13□□□□□ -1.11
HDA2YDR295C DIP2Q12220 943 aaPredicted RBP8.13□□□□□ -1.11
HDA2YDR295C TFA1P36100 482 aa8.13□□□□□ -1.11
HDA2YDR295C FAP1P53971 965 aa7.67□□□□□ -1.18
HDA2YDR295C RSE1Q04693 1361 aaKnown RBP7.58□□□□□ -1.2
HDA2YDR295C ISW2Q08773 1120 aa7.52□□□□□ -1.21
HDA2YDR295C RPG1P38249 964 aaKnown RBP7.46□□□□□ -1.22
HDA2YDR295C PRI1P10363 409 aa7.4□□□□□ -1.23
HDA2YDR295C RPL17AP05740 184 aaKnown RBP7.32□□□□□ -1.24
HDA2YDR295C RPL17BP46990 184 aaKnown RBP7.32□□□□□ -1.24
HDA2YDR295C PRY3P47033 881 aa7.25□□□□□ -1.25
HDA2YDR295C AAD16Q02895 342 aa7.2□□□□□ -1.26
HDA2YDR295C REB1P21538 810 aa7.16□□□□□ -1.26
HDA2YDR295C SPT21P35209 758 aa7.12□□□□□ -1.27
HDA2YDR295C TSR3Q12094 313 aaKnown RBP7.06□□□□□ -1.28
HDA2YDR295C RIM101P33400 625 aa7.04□□□□□ -1.28
HDA2YDR295C RQC2Q12532 1038 aaKnown RBP6.98□□□□□ -1.29
HDA2YDR295C PTP3P40048 928 aa6.94□□□□□ -1.3
HDA2YDR295C OXP1P28273 1286 aa6.86□□□□□ -1.31
HDA2YDR295C YCK3P39962 524 aa6.86□□□□□ -1.31
HDA2YDR295C YKR023WP36119 530 aaKnown RBP6.83□□□□□ -1.32
HDA2YDR295C SSP1P38871 571 aa6.81□□□□□ -1.32
HDA2YDR295C DMA1P38823 416 aa6.8□□□□□ -1.32
HDA2YDR295C YAH1Q12184 172 aaKnown RBP6.75□□□□□ -1.33
HDA2YDR295C HAA1Q12753 694 aaKnown RBP6.71□□□□□ -1.33
HDA2YDR295C MRPL32P25348 183 aa6.71□□□□□ -1.34
HDA2YDR295C YLR271WQ06152 274 aa6.7□□□□□ -1.34
HDA2YDR295C HOP09932 586 aa6.67□□□□□ -1.34
HDA2YDR295C TFC8Q12308 588 aa6.67□□□□□ -1.34
HDA2YDR295C DCD1P06773 312 aa6.66□□□□□ -1.34
HDA2YDR295C YIL055CP40523 627 aaKnown RBP6.66□□□□□ -1.34
HDA2YDR295C CDC27P38042 758 aa6.64□□□□□ -1.35
HDA2YDR295C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
HDA2YDR295C RSM7P47150 247 aa6.59□□□□□ -1.35
HDA2YDR295C MGA2P40578 1113 aa6.53□□□□□ -1.36
HDA2YDR295C CST9Q06032 482 aa6.53□□□□□ -1.36
HDA2YDR295C BCH2P36122 765 aa6.49□□□□□ -1.37
HDA2YDR295C PSD2P53037 1138 aaKnown RBP6.49□□□□□ -1.37
HDA2YDR295C AI2P03876 854 aa6.48□□□□□ -1.37
HDA2YDR295C EPS1P40557 701 aa6.38□□□□□ -1.39
HDA2YDR295C BBC1P47068 1157 aa6.37□□□□□ -1.39
HDA2YDR295C SAS10Q12136 610 aaPredicted RBP6.36□□□□□ -1.39
HDA2YDR295C BDF1P35817 686 aa6.34□□□□□ -1.39
HDA2YDR295C RAM2P29703 316 aa6.32□□□□□ -1.4
HDA2YDR295C SCY1P53009 804 aa6.32□□□□□ -1.4
HDA2YDR295C MRM1P25270 412 aa6.3□□□□□ -1.4
HDA2YDR295C RCR1P38212 213 aa6.3□□□□□ -1.4
HDA2YDR295C MAP2P38174 421 aaKnown RBP6.3□□□□□ -1.4
HDA2YDR295C TAF7Q05021 590 aa6.29□□□□□ -1.4
HDA2YDR295C UBP10P53874 792 aaPredicted RBP6.25□□□□□ -1.41
HDA2YDR295C LEO1P38439 464 aa6.22□□□□□ -1.41
HDA2YDR295C LEU3P08638 886 aa6.2□□□□□ -1.42
HDA2YDR295C RTG3P38165 486 aa6.2□□□□□ -1.42
HDA2YDR295C SET1P38827 1080 aaKnown RBP6.18□□□□□ -1.42
HDA2YDR295C YGL015CP33199 130 aa6.17□□□□□ -1.42
HDA2YDR295C VPS29P38759 282 aa6.16□□□□□ -1.42
HDA2YDR295C SLX5P32828 619 aaKnown RBP6.15□□□□□ -1.42
HDA2YDR295C MAK11P20484 414 aaKnown RBP6.14□□□□□ -1.43
HDA2YDR295C YPR148CQ06523 435 aa6.14□□□□□ -1.43
HDA2YDR295C VPS70P47161 811 aa6.09□□□□□ -1.43
HDA2YDR295C STS1P38637 319 aa6.08□□□□□ -1.44
HDA2YDR295C COQ8P27697 501 aa6.07□□□□□ -1.44
HDA2YDR295C YMR1P47147 688 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
HDA2YDR295C EDS1P38073 919 aa6.04□□□□□ -1.44
HDA2YDR295C YFR006WP43590 535 aa6.04□□□□□ -1.44
HDA2YDR295C IFH1P39520 1085 aa6.03□□□□□ -1.44
HDA2YDR295C CKB1P43639 278 aa6.03□□□□□ -1.44
HDA2YDR295C DBP1P24784 617 aaKnown RBP6.03□□□□□ -1.44
HDA2YDR295C SPB4P25808 606 aaPredicted RBP6.01□□□□□ -1.45
HDA2YDR295C MIF2P35201 549 aa5.99□□□□□ -1.45
HDA2YDR295C YOR238WQ08634 303 aa5.99□□□□□ -1.45
HDA2YDR295C RPN1P38764 993 aaKnown RBP5.98□□□□□ -1.45
HDA2YDR295C DSF2P38213 736 aa5.96□□□□□ -1.45
HDA2YDR295C NSR1P27476 414 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
HDA2YDR295C PIB1Q06651 286 aa5.96□□□□□ -1.46
HDA2YDR295C NOP53Q12080 455 aaKnown RBP5.96□□□□□ -1.46
HDA2YDR295C PBS2P08018 668 aa5.95□□□□□ -1.46
HDA2YDR295C TIF4632P39936 914 aaKnown RBP5.94□□□□□ -1.46
HDA2YDR295C PTC3P34221 468 aaKnown RBP5.94□□□□□ -1.46
HDA2YDR295C TGL3P40308 642 aa5.92□□□□□ -1.46
HDA2YDR295C YAP5P40574 245 aa5.91□□□□□ -1.46
HDA2YDR295C VMA1P17255 1071 aaKnown RBP5.9□□□□□ -1.47
HDA2YDR295C REF2P42073 533 aaPredicted RBP5.9□□□□□ -1.47
HDA2YDR295C DMA2P53924 522 aa5.89□□□□□ -1.47
HDA2YDR295C BUD31P25337 157 aaPredicted RBP5.89□□□□□ -1.47
HDA2YDR295C IES2P40154 320 aa5.86□□□□□ -1.47
HDA2YDR295C NUP42P49686 430 aaKnown RBP5.86□□□□□ -1.47
HDA2YDR295C MAM3Q12296 706 aa5.86□□□□□ -1.47
HDA2YDR295C DIT2P21595 489 aa5.85□□□□□ -1.47
HDA2YDR295C YNR021WP53723 404 aaKnown RBP5.85□□□□□ -1.47
HDA2YDR295C GLC3P32775 704 aa5.84□□□□□ -1.48
HDA2YDR295C YDR090CQ03193 310 aa5.82□□□□□ -1.48
HDA2YDR295C SAM3Q08986 587 aa5.82□□□□□ -1.48
HDA2YDR295C COX6P00427 148 aa5.82□□□□□ -1.48
HDA2YDR295C MST1P07236 462 aa5.82□□□□□ -1.48
HDA2YDR295C KIN1P13185 1064 aa5.82□□□□□ -1.48
HDA2YDR295C UBP14P38237 781 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms