RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C DRS1P32892 752 aaKnown RBP10.58□□□□□ -0.72
MSM1YGR171C MTC1P47018 478 aaKnown RBP10.35□□□□□ -0.75
MSM1YGR171C BFR2Q06631 534 aaKnown RBP9.22□□□□□ -0.93
MSM1YGR171C DIP2Q12220 943 aaPredicted RBP8.94□□□□□ -0.98
MSM1YGR171C AVT3P36062 692 aa8.85□□□□□ -0.99
MSM1YGR171C TFA1P36100 482 aa8.77□□□□□ -1
MSM1YGR171C ISW2Q08773 1120 aa8.4□□□□□ -1.06
MSM1YGR171C RSE1Q04693 1361 aaKnown RBP8.39□□□□□ -1.07
MSM1YGR171C FAP1P53971 965 aa8.37□□□□□ -1.07
MSM1YGR171C RPG1P38249 964 aaKnown RBP8.27□□□□□ -1.09
MSM1YGR171C PRI1P10363 409 aa8.2□□□□□ -1.1
MSM1YGR171C RPL17AP05740 184 aaKnown RBP8.06□□□□□ -1.12
MSM1YGR171C RPL17BP46990 184 aaKnown RBP8.06□□□□□ -1.12
MSM1YGR171C AAD16Q02895 342 aa8.05□□□□□ -1.12
MSM1YGR171C REB1P21538 810 aa7.98□□□□□ -1.13
MSM1YGR171C PRY3P47033 881 aa7.94□□□□□ -1.14
MSM1YGR171C TSR3Q12094 313 aaKnown RBP7.81□□□□□ -1.16
MSM1YGR171C SPT21P35209 758 aa7.75□□□□□ -1.17
MSM1YGR171C RIM101P33400 625 aa7.69□□□□□ -1.18
MSM1YGR171C RQC2Q12532 1038 aaKnown RBP7.67□□□□□ -1.18
MSM1YGR171C PTP3P40048 928 aa7.57□□□□□ -1.2
MSM1YGR171C MRPL32P25348 183 aa7.52□□□□□ -1.21
MSM1YGR171C YKR023WP36119 530 aaKnown RBP7.47□□□□□ -1.21
MSM1YGR171C OXP1P28273 1286 aa7.46□□□□□ -1.22
MSM1YGR171C SSP1P38871 571 aa7.45□□□□□ -1.22
MSM1YGR171C HAA1Q12753 694 aaKnown RBP7.42□□□□□ -1.22
MSM1YGR171C YIL055CP40523 627 aaKnown RBP7.4□□□□□ -1.23
MSM1YGR171C YAH1Q12184 172 aaKnown RBP7.4□□□□□ -1.23
MSM1YGR171C HOP09932 586 aa7.33□□□□□ -1.24
MSM1YGR171C TFC8Q12308 588 aa7.33□□□□□ -1.24
MSM1YGR171C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
MSM1YGR171C YCK3P39962 524 aa7.32□□□□□ -1.24
MSM1YGR171C DMA1P38823 416 aa7.31□□□□□ -1.24
MSM1YGR171C YLR271WQ06152 274 aa7.29□□□□□ -1.24
MSM1YGR171C DCD1P06773 312 aa7.28□□□□□ -1.24
MSM1YGR171C CDC27P38042 758 aa7.27□□□□□ -1.25
MSM1YGR171C RSM7P47150 247 aa7.25□□□□□ -1.25
MSM1YGR171C MGA2P40578 1113 aa7.18□□□□□ -1.26
MSM1YGR171C BCH2P36122 765 aa7.13□□□□□ -1.27
MSM1YGR171C AI2P03876 854 aa7.12□□□□□ -1.27
MSM1YGR171C BBC1P47068 1157 aa7.09□□□□□ -1.27
MSM1YGR171C CST9Q06032 482 aa7.08□□□□□ -1.28
MSM1YGR171C PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
MSM1YGR171C EPS1P40557 701 aa7.01□□□□□ -1.29
MSM1YGR171C SCY1P53009 804 aa6.98□□□□□ -1.29
MSM1YGR171C BDF1P35817 686 aa6.97□□□□□ -1.29
MSM1YGR171C UBP10P53874 792 aaPredicted RBP6.97□□□□□ -1.29
MSM1YGR171C YGL015CP33199 130 aa6.96□□□□□ -1.3
MSM1YGR171C MAP2P38174 421 aaKnown RBP6.96□□□□□ -1.3
MSM1YGR171C MRM1P25270 412 aa6.92□□□□□ -1.3
MSM1YGR171C BUD31P25337 157 aaPredicted RBP6.9□□□□□ -1.31
MSM1YGR171C SLX5P32828 619 aaKnown RBP6.85□□□□□ -1.31
MSM1YGR171C RTG3P38165 486 aa6.84□□□□□ -1.31
MSM1YGR171C SAS10Q12136 610 aaPredicted RBP6.84□□□□□ -1.31
MSM1YGR171C RAM2P29703 316 aa6.83□□□□□ -1.32
MSM1YGR171C RCR1P38212 213 aa6.82□□□□□ -1.32
MSM1YGR171C SET1P38827 1080 aaKnown RBP6.76□□□□□ -1.33
MSM1YGR171C MAK11P20484 414 aaKnown RBP6.74□□□□□ -1.33
MSM1YGR171C VPS29P38759 282 aa6.73□□□□□ -1.33
MSM1YGR171C LEO1P38439 464 aa6.71□□□□□ -1.34
MSM1YGR171C TIF4632P39936 914 aaKnown RBP6.71□□□□□ -1.34
MSM1YGR171C TAF7Q05021 590 aa6.7□□□□□ -1.34
MSM1YGR171C LEU3P08638 886 aa6.69□□□□□ -1.34
MSM1YGR171C YMR1P47147 688 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
MSM1YGR171C IFH1P39520 1085 aa6.67□□□□□ -1.34
MSM1YGR171C VPS70P47161 811 aa6.64□□□□□ -1.35
MSM1YGR171C YPR148CQ06523 435 aa6.64□□□□□ -1.35
MSM1YGR171C COQ8P27697 501 aa6.64□□□□□ -1.35
MSM1YGR171C DBP1P24784 617 aaKnown RBP6.63□□□□□ -1.35
MSM1YGR171C CKB1P43639 278 aa6.63□□□□□ -1.35
MSM1YGR171C YOR238WQ08634 303 aa6.63□□□□□ -1.35
MSM1YGR171C STS1P38637 319 aa6.62□□□□□ -1.35
MSM1YGR171C TGL3P40308 642 aa6.62□□□□□ -1.35
MSM1YGR171C YFR006WP43590 535 aa6.62□□□□□ -1.35
MSM1YGR171C MIF2P35201 549 aa6.61□□□□□ -1.35
MSM1YGR171C NSR1P27476 414 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
MSM1YGR171C SPB4P25808 606 aaPredicted RBP6.59□□□□□ -1.35
MSM1YGR171C YAP5P40574 245 aa6.59□□□□□ -1.35
MSM1YGR171C NOP53Q12080 455 aaKnown RBP6.59□□□□□ -1.36
MSM1YGR171C EDS1P38073 919 aa6.55□□□□□ -1.36
MSM1YGR171C PIB1Q06651 286 aa6.55□□□□□ -1.36
MSM1YGR171C PTC3P34221 468 aaKnown RBP6.5□□□□□ -1.37
MSM1YGR171C RPN1P38764 993 aaKnown RBP6.5□□□□□ -1.37
MSM1YGR171C PBS2P08018 668 aa6.5□□□□□ -1.37
MSM1YGR171C VMA1P17255 1071 aaKnown RBP6.48□□□□□ -1.37
MSM1YGR171C DSF2P38213 736 aa6.47□□□□□ -1.37
MSM1YGR171C REF2P42073 533 aaPredicted RBP6.46□□□□□ -1.38
MSM1YGR171C MST1P07236 462 aa6.44□□□□□ -1.38
MSM1YGR171C ATH1P48016 1211 aa6.43□□□□□ -1.38
MSM1YGR171C GTT3P39996 337 aa6.42□□□□□ -1.38
MSM1YGR171C GRE2Q12068 342 aaKnown RBP6.42□□□□□ -1.38
MSM1YGR171C MAM3Q12296 706 aa6.42□□□□□ -1.38
MSM1YGR171C GUT1P32190 709 aa6.4□□□□□ -1.38
MSM1YGR171C SAM3Q08986 587 aa6.4□□□□□ -1.38
MSM1YGR171C MAK21Q12176 1025 aaKnown RBP6.39□□□□□ -1.39
MSM1YGR171C GYP5Q12344 894 aa6.38□□□□□ -1.39
MSM1YGR171C COX6P00427 148 aa6.37□□□□□ -1.39
MSM1YGR171C SIS1P25294 352 aaKnown RBP6.36□□□□□ -1.39
MSM1YGR171C IES2P40154 320 aa6.36□□□□□ -1.39
MSM1YGR171C YNR021WP53723 404 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms