RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C MTC1P47018 478 aaKnown RBP16.73■□□□□ 0.27
RRI1YDL216C DRS1P32892 752 aaKnown RBP15.7■□□□□ 0.1
RRI1YDL216C FAP1P53971 965 aa14.95□□□□□ -0.02
RRI1YDL216C PRI1P10363 409 aa14.07□□□□□ -0.16
RRI1YDL216C PRY3P47033 881 aa14.06□□□□□ -0.16
RRI1YDL216C AAD16Q02895 342 aa13.97□□□□□ -0.17
RRI1YDL216C ISW2Q08773 1120 aa13.85□□□□□ -0.19
RRI1YDL216C DIP2Q12220 943 aaPredicted RBP13.75□□□□□ -0.21
RRI1YDL216C RPG1P38249 964 aaKnown RBP13.72□□□□□ -0.21
RRI1YDL216C TSR3Q12094 313 aaKnown RBP13.31□□□□□ -0.28
RRI1YDL216C YCK3P39962 524 aa13.3□□□□□ -0.28
RRI1YDL216C AVT3P36062 692 aa13.28□□□□□ -0.28
RRI1YDL216C RSE1Q04693 1361 aaKnown RBP13.27□□□□□ -0.29
RRI1YDL216C HAA1Q12753 694 aaKnown RBP13.19□□□□□ -0.3
RRI1YDL216C BFR2Q06631 534 aaKnown RBP13.11□□□□□ -0.31
RRI1YDL216C RPL17AP05740 184 aaKnown RBP12.86□□□□□ -0.35
RRI1YDL216C RPL17BP46990 184 aaKnown RBP12.86□□□□□ -0.35
RRI1YDL216C MRPL32P25348 183 aa12.78□□□□□ -0.36
RRI1YDL216C REB1P21538 810 aa12.77□□□□□ -0.37
RRI1YDL216C SPT21P35209 758 aa12.3□□□□□ -0.44
RRI1YDL216C YGL015CP33199 130 aa12.24□□□□□ -0.45
RRI1YDL216C CDC27P38042 758 aa12.16□□□□□ -0.46
RRI1YDL216C YKR023WP36119 530 aaKnown RBP12.15□□□□□ -0.46
RRI1YDL216C TFA1P36100 482 aa12.04□□□□□ -0.48
RRI1YDL216C HOP09932 586 aa11.9□□□□□ -0.5
RRI1YDL216C TFC8Q12308 588 aa11.9□□□□□ -0.5
RRI1YDL216C RIM101P33400 625 aa11.89□□□□□ -0.51
RRI1YDL216C DCD1P06773 312 aa11.84□□□□□ -0.51
RRI1YDL216C UBP10P53874 792 aaPredicted RBP11.78□□□□□ -0.52
RRI1YDL216C MAP2P38174 421 aaKnown RBP11.77□□□□□ -0.53
RRI1YDL216C SCY1P53009 804 aa11.55□□□□□ -0.56
RRI1YDL216C BCH2P36122 765 aa11.52□□□□□ -0.57
RRI1YDL216C OXP1P28273 1286 aa11.51□□□□□ -0.57
RRI1YDL216C SLX5P32828 619 aaKnown RBP11.38□□□□□ -0.59
RRI1YDL216C YIL055CP40523 627 aaKnown RBP11.34□□□□□ -0.59
RRI1YDL216C TIF4632P39936 914 aaKnown RBP11.31□□□□□ -0.6
RRI1YDL216C PTP3P40048 928 aa11.3□□□□□ -0.6
RRI1YDL216C TGL3P40308 642 aa11.28□□□□□ -0.6
RRI1YDL216C EPS1P40557 701 aa11.24□□□□□ -0.61
RRI1YDL216C BDF1P35817 686 aa11.19□□□□□ -0.62
RRI1YDL216C RSM7P47150 247 aa11.17□□□□□ -0.62
RRI1YDL216C YAH1Q12184 172 aaKnown RBP11.17□□□□□ -0.62
RRI1YDL216C BUD31P25337 157 aaPredicted RBP11.16□□□□□ -0.62
RRI1YDL216C AI2P03876 854 aa11.06□□□□□ -0.64
RRI1YDL216C BBC1P47068 1157 aa11.05□□□□□ -0.64
RRI1YDL216C YLR271WQ06152 274 aa11□□□□□ -0.65
RRI1YDL216C UBP9P39967 754 aa10.88□□□□□ -0.67
RRI1YDL216C SSP1P38871 571 aa10.87□□□□□ -0.67
RRI1YDL216C PSD2P53037 1138 aaKnown RBP10.82□□□□□ -0.68
RRI1YDL216C MST1P07236 462 aa10.81□□□□□ -0.68
RRI1YDL216C NSR1P27476 414 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
RRI1YDL216C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
RRI1YDL216C YOR238WQ08634 303 aa10.78□□□□□ -0.68
RRI1YDL216C YAP5P40574 245 aa10.72□□□□□ -0.69
RRI1YDL216C MRM1P25270 412 aa10.66□□□□□ -0.7
RRI1YDL216C SIS1P25294 352 aaKnown RBP10.65□□□□□ -0.7
RRI1YDL216C CST9Q06032 482 aa10.6□□□□□ -0.71
RRI1YDL216C YBL029C-AQ3E756 94 aa10.6□□□□□ -0.71
RRI1YDL216C MGA2P40578 1113 aa10.59□□□□□ -0.71
RRI1YDL216C VNX1P42839 908 aa10.52□□□□□ -0.73
RRI1YDL216C PIB1Q06651 286 aa10.48□□□□□ -0.73
RRI1YDL216C WSC3Q12215 556 aa10.48□□□□□ -0.73
RRI1YDL216C GTT3P39996 337 aa10.47□□□□□ -0.73
RRI1YDL216C RTG3P38165 486 aa10.44□□□□□ -0.74
RRI1YDL216C VPS29P38759 282 aa10.43□□□□□ -0.74
RRI1YDL216C SPP1Q03012 353 aa10.42□□□□□ -0.74
RRI1YDL216C YMR1P47147 688 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
RRI1YDL216C DBP1P24784 617 aaKnown RBP10.35□□□□□ -0.75
RRI1YDL216C RCR1P38212 213 aa10.34□□□□□ -0.75
RRI1YDL216C TIF11P38912 153 aaKnown RBP10.34□□□□□ -0.75
RRI1YDL216C YFR006WP43590 535 aa10.33□□□□□ -0.76
RRI1YDL216C STS1P38637 319 aa10.31□□□□□ -0.76
RRI1YDL216C VMA1P17255 1071 aaKnown RBP10.23□□□□□ -0.77
RRI1YDL216C ULI1P43604 169 aa10.23□□□□□ -0.77
RRI1YDL216C MSB4Q12317 492 aa10.22□□□□□ -0.77
RRI1YDL216C YOL036WQ08206 761 aa10.21□□□□□ -0.78
RRI1YDL216C IOC2Q12072 812 aa10.2□□□□□ -0.78
RRI1YDL216C SET4P42948 560 aa10.18□□□□□ -0.78
RRI1YDL216C SAM3Q08986 587 aa10.17□□□□□ -0.78
RRI1YDL216C LDB19Q12502 818 aa10.17□□□□□ -0.78
RRI1YDL216C EAP1P36041 632 aaKnown RBP10.16□□□□□ -0.78
RRI1YDL216C FKH1P40466 484 aa10.16□□□□□ -0.78
RRI1YDL216C AIR2Q12476 344 aaKnown RBP10.16□□□□□ -0.78
RRI1YDL216C RQC2Q12532 1038 aaKnown RBP10.12□□□□□ -0.79
RRI1YDL216C TRP5P00931 707 aaKnown RBP10.09□□□□□ -0.79
RRI1YDL216C RAM2P29703 316 aa10.07□□□□□ -0.8
RRI1YDL216C YJL171CP46992 396 aa10.05□□□□□ -0.8
RRI1YDL216C GYP5Q12344 894 aa10.03□□□□□ -0.8
RRI1YDL216C MAK11P20484 414 aaKnown RBP10.02□□□□□ -0.81
RRI1YDL216C RTG1P32607 177 aa10.02□□□□□ -0.81
RRI1YDL216C ABP1P15891 592 aaKnown RBP9.98□□□□□ -0.81
RRI1YDL216C YNL035CP53962 389 aaKnown RBP9.98□□□□□ -0.81
RRI1YDL216C NCR1Q12200 1170 aa9.96□□□□□ -0.82
RRI1YDL216C MIF2P35201 549 aa9.95□□□□□ -0.82
RRI1YDL216C BMT6Q12291 365 aa9.95□□□□□ -0.82
RRI1YDL216C DCW1P36091 449 aa9.94□□□□□ -0.82
RRI1YDL216C SEC61P32915 480 aa9.93□□□□□ -0.82
RRI1YDL216C HTA1P04911 132 aaKnown RBP9.92□□□□□ -0.82
RRI1YDL216C HTA2P04912 132 aa9.92□□□□□ -0.82
RRI1YDL216C EDS1P38073 919 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms