Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.76■■□□□ 1.07
CSPG4P5Q96PW8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 CCDC92B-201ENST00000575506 885 ntBASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSPG4P5Q96PW8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSPG4P5Q96PW8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.73■■□□□ 1.07
CSPG4P5Q96PW8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSPG4P5Q96PW8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 KRT18P14-201ENST00000534205 1250 ntBASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.71■■□□□ 1.07
CSPG4P5Q96PW8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.7■■□□□ 1.07
CSPG4P5Q96PW8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms