Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC12.46□□□□□ -0.419e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-208ENST00000568875 1741 ntTSL 212.26□□□□□ -0.459e-9■□□□□ 9.1
DDX3XO00571 RNA5SP370-201ENST00000362545 121 ntBASIC12.12□□□□□ -0.479e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-202ENST00000316634 1002 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.479e-9■□□□□ 9.1
DDX3XO00571 SNAPC5-201ENST00000307979 794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.489e-9■□□□□ 9.1
DDX3XO00571 VPS52-217ENST00000478934 2602 ntTSL 211.81□□□□□ -0.529e-9■□□□□ 9.1
DDX3XO00571 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.561e-12■□□□□ 9.1
DDX3XO00571 SNAPC5-204ENST00000562411 587 ntTSL 311.32□□□□□ -0.69e-9■□□□□ 9.1
DDX3XO00571 DECR1-216ENST00000522583 651 ntTSL 39.51□□□□□ -0.899e-9■□□□□ 9.1
DDX3XO00571 ANAPC13-203ENST00000508755 686 ntTSL 1 (best)5.74□□□□□ -1.499e-9■□□□□ 9.1
DDX3XO00571 WDR66-209ENST00000546044 528 ntTSL 35.39□□□□□ -1.559e-9■□□□□ 9.1
DDX3XO00571 TALDO1-209ENST00000533796 503 ntTSL 211.68□□□□□ -0.546e-22■□□□□ 9.1
DDX3XO00571 TEAD4-207ENST00000543035 801 ntTSL 526.71■■□□□ 1.871e-9■□□□□ 9.1
DDX3XO00571 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.911e-9■□□□□ 9.1
DDX3XO00571 IL4I1-208ENST00000601717 2261 ntTSL 1 (best)20.66■□□□□ 0.91e-9■□□□□ 9.1
DDX3XO00571 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.671e-9■□□□□ 9.1
DDX3XO00571 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.621e-9■□□□□ 9.1
DDX3XO00571 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.611e-9■□□□□ 9.1
DDX3XO00571 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.581e-9■□□□□ 9.1
DDX3XO00571 IL4I1-206ENST00000596022 747 ntTSL 217.71■□□□□ 0.431e-9■□□□□ 9.1
DDX3XO00571 NUP62-206ENST00000595463 563 ntTSL 416.7■□□□□ 0.261e-9■□□□□ 9.1
DDX3XO00571 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.66■□□□□ 0.261e-9■□□□□ 9.1
DDX3XO00571 NUP62-204ENST00000594673 564 ntTSL 516.49■□□□□ 0.231e-9■□□□□ 9.1
DDX3XO00571 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.12■□□□□ 0.171e-9■□□□□ 9.1
DDX3XO00571 NUP62-221ENST00000600645 567 ntTSL 414.41□□□□□ -0.11e-9■□□□□ 9.1
DDX3XO00571 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.261e-9■□□□□ 9.1
DDX3XO00571 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.281e-9■□□□□ 9.1
DDX3XO00571 IL4I1-205ENST00000596011 714 ntTSL 213.07□□□□□ -0.321e-9■□□□□ 9.1
DDX3XO00571 CAMK2N1-202ENST00000489020 812 ntTSL 313.06□□□□□ -0.321e-9■□□□□ 9.1
DDX3XO00571 TEAD4-204ENST00000443986 641 ntTSL 312.85□□□□□ -0.351e-9■□□□□ 9.1
DDX3XO00571 IL4I1-207ENST00000597295 651 ntTSL 312.35□□□□□ -0.431e-9■□□□□ 9.1
DDX3XO00571 NUDCD1-203ENST00000519607 2286 ntTSL 1 (best)12.34□□□□□ -0.431e-9■□□□□ 9.1
DDX3XO00571 NUP62-209ENST00000596437 894 ntTSL 411.92□□□□□ -0.51e-9■□□□□ 9.1
DDX3XO00571 NUP62-223ENST00000601665 531 ntTSL 511.82□□□□□ -0.521e-9■□□□□ 9.1
DDX3XO00571 NUP62-220ENST00000600583 782 ntTSL 411.62□□□□□ -0.551e-9■□□□□ 9.1
DDX3XO00571 NUP62-216ENST00000599560 562 ntTSL 211.53□□□□□ -0.561e-9■□□□□ 9.1
DDX3XO00571 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.691e-9■□□□□ 9.1
DDX3XO00571 NUP62-222ENST00000600935 587 ntTSL 410.64□□□□□ -0.711e-9■□□□□ 9.1
DDX3XO00571 NUP62-218ENST00000599788 564 ntTSL 410.29□□□□□ -0.761e-9■□□□□ 9.1
DDX3XO00571 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.771e-9■□□□□ 9.1
DDX3XO00571 NUP62-203ENST00000593652 905 ntTSL 210.11□□□□□ -0.791e-9■□□□□ 9.1
DDX3XO00571 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.81e-9■□□□□ 9.1
DDX3XO00571 NUP62-217ENST00000599567 579 ntTSL 48.66□□□□□ -1.021e-9■□□□□ 9.1
DDX3XO00571 AHSA1-212ENST00000556963 787 ntTSL 27.73□□□□□ -1.179e-27■□□□□ 9.1
DDX3XO00571 NUP62-207ENST00000595761 533 ntTSL 47.31□□□□□ -1.241e-9■□□□□ 9.1
DDX3XO00571 NUP62-210ENST00000596680 473 ntTSL 26.28□□□□□ -1.41e-9■□□□□ 9.1
DDX3XO00571 CCT4-202ENST00000461370 388 ntTSL 25.84□□□□□ -1.479e-27■□□□□ 9.1
DDX3XO00571 ACADSB-203ENST00000411816 512 ntTSL 35□□□□□ -1.611e-9■□□□□ 9.1
DDX3XO00571 SELENOF-206ENST00000497861 266 ntTSL 33.54□□□□□ -1.841e-9■□□□□ 9.1
DDX3XO00571 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.65■■■□□ 2.189e-18■□□□□ 9.1
DDX3XO00571 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.959e-18■□□□□ 9.1
DDX3XO00571 TCEA2-201ENST00000339217 953 ntTSL 326.78■■□□□ 1.889e-18■□□□□ 9.1
DDX3XO00571 TCEA2-216ENST00000487164 1060 ntTSL 1 (best)24.06■■□□□ 1.449e-18■□□□□ 9.1
DDX3XO00571 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.51■□□□□ 0.079e-18■□□□□ 9.1
DDX3XO00571 TCEA2-214ENST00000476113 421 ntTSL 212.48□□□□□ -0.419e-18■□□□□ 9.1
DDX3XO00571 TOMM5-204ENST00000540941 3071 ntTSL 1 (best)12.38□□□□□ -0.436e-20■□□□□ 9.1
DDX3XO00571 DHCR7-212ENST00000534795 979 ntTSL 1 (best)13.98□□□□□ -0.172e-6■□□□□ 9.1
DDX3XO00571 C2orf82-204ENST00000448993 357 ntAPPRIS ALT2 TSL 513.7□□□□□ -0.225e-21■□□□□ 9.1
DDX3XO00571 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.134e-6■□□□□ 9.1
DDX3XO00571 RPS27-204ENST00000493224 573 ntTSL 217.26■□□□□ 0.351e-323■□□□□ 9.1
DDX3XO00571 RPS27-203ENST00000477151 467 ntTSL 211.32□□□□□ -0.61e-323■□□□□ 9.1
DDX3XO00571 RPS27-202ENST00000392558 625 ntTSL 2 BASIC9.86□□□□□ -0.831e-323■□□□□ 9.1
DDX3XO00571 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.181e-323■□□□□ 9.1
DDX3XO00571 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.55■■□□□ 1.521e-15■□□□□ 9.1
DDX3XO00571 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)17.47■□□□□ 0.391e-15■□□□□ 9.1
DDX3XO00571 PCYT2-215ENST00000573927 778 ntTSL 316.31■□□□□ 0.21e-15■□□□□ 9.1
DDX3XO00571 PCYT2-209ENST00000572157 442 ntTSL 412.26□□□□□ -0.451e-15■□□□□ 9.1
DDX3XO00571 ABCC10-206ENST00000443426 774 ntTSL 221.69■■□□□ 1.064e-8■□□□□ 9.1
DDX3XO00571 CSNK1G2-211ENST00000615564 964 ntTSL 519.41■□□□□ 0.74e-8■□□□□ 9.1
DDX3XO00571 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.614e-8■□□□□ 9.1
DDX3XO00571 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.054e-8■□□□□ 9.1
DDX3XO00571 LDLR-201ENST00000252444 5337 ntAPPRIS ALT2 TSL 1 (best)14.12□□□□□ -0.154e-8■□□□□ 9.1
DDX3XO00571 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.184e-8■□□□□ 9.1
DDX3XO00571 RAI1-203ENST00000471135 570 ntTSL 313.38□□□□□ -0.274e-8■□□□□ 9.1
DDX3XO00571 ENO1-206ENST00000497492 647 ntTSL 212.65□□□□□ -0.382e-44■□□□□ 9.1
DDX3XO00571 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.934e-10■□□□□ 9.1
DDX3XO00571 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.95■□□□□ 0.784e-10■□□□□ 9.1
DDX3XO00571 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.74e-10■□□□□ 9.1
DDX3XO00571 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.614e-10■□□□□ 9.1
DDX3XO00571 CHTOP-206ENST00000495554 2553 ntTSL 216.08■□□□□ 0.164e-10■□□□□ 9.1
DDX3XO00571 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.75□□□□□ -2.291e-17■□□□□ 9
DDX3XO00571 FST-203ENST00000491717 640 ntTSL 29.59□□□□□ -0.873e-12■□□□□ 9
DDX3XO00571 SETD5-214ENST00000463180 685 ntTSL 219.94■□□□□ 0.789e-22■□□□□ 9
DDX3XO00571 SETD5-207ENST00000415650 579 ntTSL 414.73□□□□□ -0.059e-22■□□□□ 9
DDX3XO00571 C19orf48-212ENST00000600373 709 ntTSL 213.25□□□□□ -0.295e-7■□□□□ 9
DDX3XO00571 C19orf48-206ENST00000596554 727 ntTSL 312.91□□□□□ -0.345e-7■□□□□ 9
DDX3XO00571 C19orf48-213ENST00000601267 782 ntTSL 212.62□□□□□ -0.395e-7■□□□□ 9
DDX3XO00571 C19orf48-205ENST00000596287 827 ntTSL 211.98□□□□□ -0.495e-7■□□□□ 9
DDX3XO00571 SETD5-211ENST00000443339 3478 ntTSL 211.82□□□□□ -0.529e-22■□□□□ 9
DDX3XO00571 C19orf48-204ENST00000595794 941 ntTSL 1 (best)11.73□□□□□ -0.535e-7■□□□□ 9
DDX3XO00571 C19orf48-211ENST00000599004 866 ntTSL 511.73□□□□□ -0.535e-7■□□□□ 9
DDX3XO00571 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.069e-22■□□□□ 9
DDX3XO00571 SETD5-221ENST00000478475 477 ntTSL 47.42□□□□□ -1.229e-22■□□□□ 9
DDX3XO00571 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.885e-7■□□□□ 9
DDX3XO00571 GPR162-207ENST00000545321 683 ntTSL 226.77■■□□□ 1.885e-7■□□□□ 9
DDX3XO00571 FOXP1-207ENST00000471386 299 ntTSL 1 (best)26.32■■□□□ 1.85e-7■□□□□ 9
DDX3XO00571 TLN2-210ENST00000561322 249 ntTSL 525.31■■□□□ 1.645e-7■□□□□ 9
DDX3XO00571 MARK4-209ENST00000592762 683 ntTSL 525.26■■□□□ 1.635e-7■□□□□ 9
DDX3XO00571 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.615e-7■□□□□ 9
DDX3XO00571 TRIP10-211ENST00000600491 1493 ntTSL 224.92■■□□□ 1.585e-7■□□□□ 9
Retrieved 100 of 47,714 protein–RNA pairs in 4476.6 ms