RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
CCT4-202ENST00000461370 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
CCT4-202ENST00000461370 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
CCT4-202ENST00000461370 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
CCT4-202ENST00000461370 FOXD1Q16676 465 aa18.18■□□□□ 0.5
CCT4-202ENST00000461370 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
CCT4-202ENST00000461370 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
CCT4-202ENST00000461370 ADRA2BP18089 450 aa17.34■□□□□ 0.37
CCT4-202ENST00000461370 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
CCT4-202ENST00000461370 MSH5O43196 834 aa16.88■□□□□ 0.29
CCT4-202ENST00000461370 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
CCT4-202ENST00000461370 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
CCT4-202ENST00000461370 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
CCT4-202ENST00000461370 DMRT2Q9Y5R5 561 aa15.62■□□□□ 0.09
CCT4-202ENST00000461370 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
CCT4-202ENST00000461370 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
CCT4-202ENST00000461370 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
CCT4-202ENST00000461370 KCNA4P22459 653 aa15.4■□□□□ 0.06
CCT4-202ENST00000461370 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
CCT4-202ENST00000461370 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
CCT4-202ENST00000461370 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
CCT4-202ENST00000461370 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
CCT4-202ENST00000461370 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
CCT4-202ENST00000461370 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
CCT4-202ENST00000461370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCT4-202ENST00000461370 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
CCT4-202ENST00000461370 RNF39Q9H2S5 420 aa14.42□□□□□ -0.1
CCT4-202ENST00000461370 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
CCT4-202ENST00000461370 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
CCT4-202ENST00000461370 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
CCT4-202ENST00000461370 ZBTB22O15209 634 aa14.16□□□□□ -0.14
CCT4-202ENST00000461370 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
CCT4-202ENST00000461370 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
CCT4-202ENST00000461370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
CCT4-202ENST00000461370 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
CCT4-202ENST00000461370 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
CCT4-202ENST00000461370 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
CCT4-202ENST00000461370 APLP2Q06481 763 aa13.99□□□□□ -0.17
CCT4-202ENST00000461370 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
CCT4-202ENST00000461370 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
CCT4-202ENST00000461370 CAPN15O75808 1086 aa13.88□□□□□ -0.19
CCT4-202ENST00000461370 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
CCT4-202ENST00000461370 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
CCT4-202ENST00000461370 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
CCT4-202ENST00000461370 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
CCT4-202ENST00000461370 DSG3P32926 999 aa13.66□□□□□ -0.22
CCT4-202ENST00000461370 ABCB7O75027 752 aa13.6□□□□□ -0.23
CCT4-202ENST00000461370 POLA2Q14181 598 aa13.5□□□□□ -0.25
CCT4-202ENST00000461370 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CCT4-202ENST00000461370 FBLN2P98095 1184 aa13.21□□□□□ -0.29
CCT4-202ENST00000461370 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
CCT4-202ENST00000461370 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
CCT4-202ENST00000461370 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
CCT4-202ENST00000461370 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
CCT4-202ENST00000461370 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
CCT4-202ENST00000461370 SPDYE2Q495Y8 402 aa12.94□□□□□ -0.34
CCT4-202ENST00000461370 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
CCT4-202ENST00000461370 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
CCT4-202ENST00000461370 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
CCT4-202ENST00000461370 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
CCT4-202ENST00000461370 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
CCT4-202ENST00000461370 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCT4-202ENST00000461370 FKBP8Q14318 412 aa12.65□□□□□ -0.38
CCT4-202ENST00000461370 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
CCT4-202ENST00000461370 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
CCT4-202ENST00000461370 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
CCT4-202ENST00000461370 PROM2Q8N271 834 aa12.54□□□□□ -0.4
CCT4-202ENST00000461370 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
CCT4-202ENST00000461370 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
CCT4-202ENST00000461370 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CCT4-202ENST00000461370 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.432e-11■■■□□ 15.4
CCT4-202ENST00000461370 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
CCT4-202ENST00000461370 POTEHQ6S545 545 aa12.32□□□□□ -0.44
CCT4-202ENST00000461370 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CCT4-202ENST00000461370 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
CCT4-202ENST00000461370 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
CCT4-202ENST00000461370 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
CCT4-202ENST00000461370 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
CCT4-202ENST00000461370 MIER1Q8N108 512 aa12.12□□□□□ -0.47
CCT4-202ENST00000461370 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
CCT4-202ENST00000461370 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
CCT4-202ENST00000461370 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
CCT4-202ENST00000461370 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
CCT4-202ENST00000461370 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
CCT4-202ENST00000461370 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCT4-202ENST00000461370 HAX1O00165 279 aa12□□□□□ -0.49
CCT4-202ENST00000461370 C19orf67A6NJJ6 358 aa11.95□□□□□ -0.5
CCT4-202ENST00000461370 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
CCT4-202ENST00000461370 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
CCT4-202ENST00000461370 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
CCT4-202ENST00000461370 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
CCT4-202ENST00000461370 EVX2Q03828 476 aa11.83□□□□□ -0.52
CCT4-202ENST00000461370 NUBP1P53384 320 aa11.82□□□□□ -0.52
CCT4-202ENST00000461370 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
CCT4-202ENST00000461370 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CCT4-202ENST00000461370 SP7Q8TDD2 431 aaPredicted RBP11.8□□□□□ -0.52
CCT4-202ENST00000461370 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
CCT4-202ENST00000461370 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CCT4-202ENST00000461370 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
CCT4-202ENST00000461370 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms