RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
NUDCD1-201ENST00000239690 SUPT5HO00267 1087 aaKnown RBP15.61■□□□□ 0.09
NUDCD1-201ENST00000239690 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
NUDCD1-201ENST00000239690 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
NUDCD1-201ENST00000239690 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
NUDCD1-201ENST00000239690 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
NUDCD1-201ENST00000239690 MYT1Q01538 1121 aa15.18■□□□□ 0.02
NUDCD1-201ENST00000239690 HRCP23327 699 aa15.17■□□□□ 0.02
NUDCD1-201ENST00000239690 ZEB1P37275 1124 aaPredicted RBP15.02■□□□□ -0
NUDCD1-201ENST00000239690 CENPBP07199 599 aaPredicted RBP14.93□□□□□ -0.02
NUDCD1-201ENST00000239690 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.04
NUDCD1-201ENST00000239690 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
NUDCD1-201ENST00000239690 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
NUDCD1-201ENST00000239690 CCER1Q8TC90 406 aaPredicted RBP14.62□□□□□ -0.07
NUDCD1-201ENST00000239690 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
NUDCD1-201ENST00000239690 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
NUDCD1-201ENST00000239690 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
NUDCD1-201ENST00000239690 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
NUDCD1-201ENST00000239690 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
NUDCD1-201ENST00000239690 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
NUDCD1-201ENST00000239690 APLP2Q06481 763 aa14.33□□□□□ -0.11
NUDCD1-201ENST00000239690 ERICH6Q7L0X2 663 aa14.33□□□□□ -0.12
NUDCD1-201ENST00000239690 GTF3C3Q9Y5Q9 886 aa14.28□□□□□ -0.12
NUDCD1-201ENST00000239690 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
NUDCD1-201ENST00000239690 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
NUDCD1-201ENST00000239690 NEFLP07196 543 aa14.17□□□□□ -0.14
NUDCD1-201ENST00000239690 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
NUDCD1-201ENST00000239690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
NUDCD1-201ENST00000239690 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
NUDCD1-201ENST00000239690 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
NUDCD1-201ENST00000239690 NEUROD1Q13562 356 aa13.96□□□□□ -0.17
NUDCD1-201ENST00000239690 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
NUDCD1-201ENST00000239690 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
NUDCD1-201ENST00000239690 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
NUDCD1-201ENST00000239690 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.2
NUDCD1-201ENST00000239690 CLSPNQ9HAW4 1339 aa13.75□□□□□ -0.21
NUDCD1-201ENST00000239690 BCANQ96GW7 911 aa13.71□□□□□ -0.22
NUDCD1-201ENST00000239690 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
NUDCD1-201ENST00000239690 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
NUDCD1-201ENST00000239690 ITGAEP38570 1179 aa13.57□□□□□ -0.24
NUDCD1-201ENST00000239690 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
NUDCD1-201ENST00000239690 ANP32EQ9BTT0 268 aa13.54□□□□□ -0.24
NUDCD1-201ENST00000239690 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
NUDCD1-201ENST00000239690 MIER1Q8N108 512 aa13.53□□□□□ -0.24
NUDCD1-201ENST00000239690 DAXXQ9UER7 740 aaPredicted RBP13.49□□□□□ -0.25
NUDCD1-201ENST00000239690 FKBP8Q14318 412 aa13.47□□□□□ -0.25
NUDCD1-201ENST00000239690 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
NUDCD1-201ENST00000239690 MYT1LQ9UL68 1186 aa13.45□□□□□ -0.26
NUDCD1-201ENST00000239690 ANP32CO43423 234 aa13.44□□□□□ -0.26
NUDCD1-201ENST00000239690 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
NUDCD1-201ENST00000239690 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
NUDCD1-201ENST00000239690 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
NUDCD1-201ENST00000239690 ANP32AP39687 249 aaKnown RBP13.29□□□□□ -0.28
NUDCD1-201ENST00000239690 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
NUDCD1-201ENST00000239690 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
NUDCD1-201ENST00000239690 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
NUDCD1-201ENST00000239690 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
NUDCD1-201ENST00000239690 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
NUDCD1-201ENST00000239690 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
NUDCD1-201ENST00000239690 NBR1Q14596 966 aa13.18□□□□□ -0.3
NUDCD1-201ENST00000239690 HNRNPUQ00839 825 aaKnown RBP eCLIP13.18□□□□□ -0.3
NUDCD1-201ENST00000239690 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
NUDCD1-201ENST00000239690 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-201ENST00000239690 CEP162Q5TB80 1403 aa13.1□□□□□ -0.31
NUDCD1-201ENST00000239690 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
NUDCD1-201ENST00000239690 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
NUDCD1-201ENST00000239690 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
NUDCD1-201ENST00000239690 RSF1Q96T23 1441 aaPredicted RBP13.04□□□□□ -0.32
NUDCD1-201ENST00000239690 GLIPR1L2Q4G1C9 344 aa13.02□□□□□ -0.32
NUDCD1-201ENST00000239690 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
NUDCD1-201ENST00000239690 TONSLQ96HA7 1378 aa13.01□□□□□ -0.33
NUDCD1-201ENST00000239690 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
NUDCD1-201ENST00000239690 DEKP35659 375 aaKnown RBP12.99□□□□□ -0.33
NUDCD1-201ENST00000239690 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
NUDCD1-201ENST00000239690 CLIP1P30622 1438 aa12.98□□□□□ -0.33
NUDCD1-201ENST00000239690 EEA1Q15075 1411 aa12.97□□□□□ -0.33
NUDCD1-201ENST00000239690 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
NUDCD1-201ENST00000239690 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
NUDCD1-201ENST00000239690 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
NUDCD1-201ENST00000239690 HIRIP3Q9BW71 556 aaPredicted RBP12.93□□□□□ -0.34
NUDCD1-201ENST00000239690 PPP4R2Q9NY27 417 aa12.93□□□□□ -0.34
NUDCD1-201ENST00000239690 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
NUDCD1-201ENST00000239690 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
NUDCD1-201ENST00000239690 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
NUDCD1-201ENST00000239690 RB1CC1Q8TDY2 1594 aa12.87□□□□□ -0.35
NUDCD1-201ENST00000239690 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
NUDCD1-201ENST00000239690 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.35
NUDCD1-201ENST00000239690 NEFMP07197 916 aa12.83□□□□□ -0.35
NUDCD1-201ENST00000239690 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
NUDCD1-201ENST00000239690 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
NUDCD1-201ENST00000239690 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
NUDCD1-201ENST00000239690 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
NUDCD1-201ENST00000239690 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
NUDCD1-201ENST00000239690 ABCC9O60706 1549 aa12.78□□□□□ -0.36
NUDCD1-201ENST00000239690 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.36
NUDCD1-201ENST00000239690 EIF4G2P78344 907 aaKnown RBP eCLIP12.77□□□□□ -0.37
NUDCD1-201ENST00000239690 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
NUDCD1-201ENST00000239690 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
NUDCD1-201ENST00000239690 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
NUDCD1-201ENST00000239690 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms