RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
SNAPC5-208ENST00000568875 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
SNAPC5-208ENST00000568875 ABCC9O60706 1549 aa24.37■■□□□ 1.49
SNAPC5-208ENST00000568875 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
SNAPC5-208ENST00000568875 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.32
SNAPC5-208ENST00000568875 NACADO15069 1562 aa23.31■■□□□ 1.32
SNAPC5-208ENST00000568875 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
SNAPC5-208ENST00000568875 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
SNAPC5-208ENST00000568875 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
SNAPC5-208ENST00000568875 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
SNAPC5-208ENST00000568875 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
SNAPC5-208ENST00000568875 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
SNAPC5-208ENST00000568875 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
SNAPC5-208ENST00000568875 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
SNAPC5-208ENST00000568875 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
SNAPC5-208ENST00000568875 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.13
SNAPC5-208ENST00000568875 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
SNAPC5-208ENST00000568875 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
SNAPC5-208ENST00000568875 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
SNAPC5-208ENST00000568875 NCAPD3P42695 1498 aa21.56■■□□□ 1.04
SNAPC5-208ENST00000568875 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
SNAPC5-208ENST00000568875 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
SNAPC5-208ENST00000568875 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
SNAPC5-208ENST00000568875 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
SNAPC5-208ENST00000568875 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
SNAPC5-208ENST00000568875 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
SNAPC5-208ENST00000568875 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
SNAPC5-208ENST00000568875 WIZO95785 1651 aa21.16■□□□□ 0.98
SNAPC5-208ENST00000568875 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
SNAPC5-208ENST00000568875 NESP48681 1621 aa21.06■□□□□ 0.96
SNAPC5-208ENST00000568875 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
SNAPC5-208ENST00000568875 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
SNAPC5-208ENST00000568875 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
SNAPC5-208ENST00000568875 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
SNAPC5-208ENST00000568875 PDS5BQ9NTI5 1447 aa20.85■□□□□ 0.93
SNAPC5-208ENST00000568875 CUX2O14529 1486 aa20.83■□□□□ 0.93
SNAPC5-208ENST00000568875 CFTRP13569 1480 aa20.76■□□□□ 0.91
SNAPC5-208ENST00000568875 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
SNAPC5-208ENST00000568875 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
SNAPC5-208ENST00000568875 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
SNAPC5-208ENST00000568875 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.9
SNAPC5-208ENST00000568875 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
SNAPC5-208ENST00000568875 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
SNAPC5-208ENST00000568875 WDR62O43379 1518 aa20.55■□□□□ 0.88
SNAPC5-208ENST00000568875 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
SNAPC5-208ENST00000568875 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
SNAPC5-208ENST00000568875 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
SNAPC5-208ENST00000568875 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
SNAPC5-208ENST00000568875 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
SNAPC5-208ENST00000568875 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
SNAPC5-208ENST00000568875 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
SNAPC5-208ENST00000568875 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
SNAPC5-208ENST00000568875 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
SNAPC5-208ENST00000568875 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
SNAPC5-208ENST00000568875 CUX1P39880 1505 aa20.1■□□□□ 0.81
SNAPC5-208ENST00000568875 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.81
SNAPC5-208ENST00000568875 SOGA1O94964 1423 aa20.06■□□□□ 0.8
SNAPC5-208ENST00000568875 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
SNAPC5-208ENST00000568875 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
SNAPC5-208ENST00000568875 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNAPC5-208ENST00000568875 OSCARQ8IYS5 282 aa20.02■□□□□ 0.79
SNAPC5-208ENST00000568875 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
SNAPC5-208ENST00000568875 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
SNAPC5-208ENST00000568875 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
SNAPC5-208ENST00000568875 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
SNAPC5-208ENST00000568875 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
SNAPC5-208ENST00000568875 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
SNAPC5-208ENST00000568875 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
SNAPC5-208ENST00000568875 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
SNAPC5-208ENST00000568875 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
SNAPC5-208ENST00000568875 FBLN2P98095 1184 aa19.82■□□□□ 0.76
SNAPC5-208ENST00000568875 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
SNAPC5-208ENST00000568875 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
SNAPC5-208ENST00000568875 MAGI1Q96QZ7 1491 aaPredicted RBP19.77■□□□□ 0.76
SNAPC5-208ENST00000568875 CHD1O14646 1710 aa19.77■□□□□ 0.75
SNAPC5-208ENST00000568875 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
SNAPC5-208ENST00000568875 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
SNAPC5-208ENST00000568875 SYNJ2O15056 1496 aa19.7■□□□□ 0.74
SNAPC5-208ENST00000568875 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
SNAPC5-208ENST00000568875 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
SNAPC5-208ENST00000568875 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
SNAPC5-208ENST00000568875 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
SNAPC5-208ENST00000568875 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
SNAPC5-208ENST00000568875 ARHGEF11O15085 1522 aa19.62■□□□□ 0.73
SNAPC5-208ENST00000568875 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
SNAPC5-208ENST00000568875 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
SNAPC5-208ENST00000568875 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
SNAPC5-208ENST00000568875 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
SNAPC5-208ENST00000568875 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
SNAPC5-208ENST00000568875 KIF27Q86VH2 1401 aa19.52■□□□□ 0.71
SNAPC5-208ENST00000568875 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
SNAPC5-208ENST00000568875 IGF1RP08069 1367 aa19.51■□□□□ 0.71
SNAPC5-208ENST00000568875 NUP160Q12769 1436 aa19.5■□□□□ 0.71
SNAPC5-208ENST00000568875 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
SNAPC5-208ENST00000568875 CEP170Q5SW79 1584 aa19.45■□□□□ 0.7
SNAPC5-208ENST00000568875 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
SNAPC5-208ENST00000568875 CUL7Q14999 1698 aa19.35■□□□□ 0.69
SNAPC5-208ENST00000568875 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
SNAPC5-208ENST00000568875 RUSC2Q8N2Y8 1516 aa19.33■□□□□ 0.68
SNAPC5-208ENST00000568875 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms