RNA–Protein interactions for RNA: ENST00000595794.5

C19orf48-204, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 1 (best)

Gene C19orf48, Length 941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-204ENST00000595794 NISCHQ9Y2I1 1504 aa27.64■■■□□ 2.02
C19orf48-204ENST00000595794 ABCC9O60706 1549 aa25.21■■□□□ 1.63
C19orf48-204ENST00000595794 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
C19orf48-204ENST00000595794 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
C19orf48-204ENST00000595794 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
C19orf48-204ENST00000595794 NACADO15069 1562 aa23.66■■□□□ 1.38
C19orf48-204ENST00000595794 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
C19orf48-204ENST00000595794 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
C19orf48-204ENST00000595794 UNC13AQ9UPW8 1703 aa23.38■■□□□ 1.33
C19orf48-204ENST00000595794 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
C19orf48-204ENST00000595794 BICRAQ9NZM4 1560 aa23.17■■□□□ 1.3
C19orf48-204ENST00000595794 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
C19orf48-204ENST00000595794 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
C19orf48-204ENST00000595794 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
C19orf48-204ENST00000595794 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
C19orf48-204ENST00000595794 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
C19orf48-204ENST00000595794 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
C19orf48-204ENST00000595794 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
C19orf48-204ENST00000595794 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
C19orf48-204ENST00000595794 CUX2O14529 1486 aa21.85■■□□□ 1.09
C19orf48-204ENST00000595794 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
C19orf48-204ENST00000595794 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
C19orf48-204ENST00000595794 ATAD2BQ9ULI0 1458 aa21.71■■□□□ 1.07
C19orf48-204ENST00000595794 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
C19orf48-204ENST00000595794 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
C19orf48-204ENST00000595794 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
C19orf48-204ENST00000595794 NESP48681 1621 aa21.55■■□□□ 1.04
C19orf48-204ENST00000595794 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
C19orf48-204ENST00000595794 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
C19orf48-204ENST00000595794 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
C19orf48-204ENST00000595794 PEG3Q9GZU2 1588 aa21.42■■□□□ 1.02
C19orf48-204ENST00000595794 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
C19orf48-204ENST00000595794 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
C19orf48-204ENST00000595794 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
C19orf48-204ENST00000595794 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
C19orf48-204ENST00000595794 CADPSQ9ULU8 1353 aa21.14■□□□□ 0.98
C19orf48-204ENST00000595794 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
C19orf48-204ENST00000595794 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
C19orf48-204ENST00000595794 WDR62O43379 1518 aa21.06■□□□□ 0.96
C19orf48-204ENST00000595794 WIZO95785 1651 aa21.04■□□□□ 0.96
C19orf48-204ENST00000595794 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
C19orf48-204ENST00000595794 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
C19orf48-204ENST00000595794 CFTRP13569 1480 aa20.84■□□□□ 0.93
C19orf48-204ENST00000595794 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
C19orf48-204ENST00000595794 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
C19orf48-204ENST00000595794 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
C19orf48-204ENST00000595794 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
C19orf48-204ENST00000595794 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
C19orf48-204ENST00000595794 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
C19orf48-204ENST00000595794 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
C19orf48-204ENST00000595794 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
C19orf48-204ENST00000595794 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
C19orf48-204ENST00000595794 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
C19orf48-204ENST00000595794 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
C19orf48-204ENST00000595794 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
C19orf48-204ENST00000595794 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
C19orf48-204ENST00000595794 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
C19orf48-204ENST00000595794 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
C19orf48-204ENST00000595794 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
C19orf48-204ENST00000595794 CHD1O14646 1710 aa20.37■□□□□ 0.85
C19orf48-204ENST00000595794 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
C19orf48-204ENST00000595794 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
C19orf48-204ENST00000595794 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84not detected■■■■□ 26.1
C19orf48-204ENST00000595794 FBLN2P98095 1184 aa20.27■□□□□ 0.84
C19orf48-204ENST00000595794 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
C19orf48-204ENST00000595794 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
C19orf48-204ENST00000595794 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
C19orf48-204ENST00000595794 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
C19orf48-204ENST00000595794 SOGA1O94964 1423 aa20.17■□□□□ 0.82
C19orf48-204ENST00000595794 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
C19orf48-204ENST00000595794 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
C19orf48-204ENST00000595794 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
C19orf48-204ENST00000595794 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
C19orf48-204ENST00000595794 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
C19orf48-204ENST00000595794 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
C19orf48-204ENST00000595794 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
C19orf48-204ENST00000595794 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
C19orf48-204ENST00000595794 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
C19orf48-204ENST00000595794 CUX1P39880 1505 aa20.02■□□□□ 0.79
C19orf48-204ENST00000595794 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
C19orf48-204ENST00000595794 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
C19orf48-204ENST00000595794 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
C19orf48-204ENST00000595794 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
C19orf48-204ENST00000595794 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
C19orf48-204ENST00000595794 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
C19orf48-204ENST00000595794 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
C19orf48-204ENST00000595794 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
C19orf48-204ENST00000595794 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
C19orf48-204ENST00000595794 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
C19orf48-204ENST00000595794 CEP170Q5SW79 1584 aa19.7■□□□□ 0.74
C19orf48-204ENST00000595794 NUP160Q12769 1436 aa19.69■□□□□ 0.74
C19orf48-204ENST00000595794 SHROOM2Q13796 1616 aa19.66■□□□□ 0.74
C19orf48-204ENST00000595794 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
C19orf48-204ENST00000595794 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
C19orf48-204ENST00000595794 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
C19orf48-204ENST00000595794 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
C19orf48-204ENST00000595794 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
C19orf48-204ENST00000595794 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.73
C19orf48-204ENST00000595794 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
C19orf48-204ENST00000595794 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms