RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
C19orf48-211ENST00000599004 ABCC9O60706 1549 aa28.02■■■□□ 2.08
C19orf48-211ENST00000599004 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
C19orf48-211ENST00000599004 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
C19orf48-211ENST00000599004 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
C19orf48-211ENST00000599004 NACADO15069 1562 aa26.15■■□□□ 1.78
C19orf48-211ENST00000599004 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
C19orf48-211ENST00000599004 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
C19orf48-211ENST00000599004 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
C19orf48-211ENST00000599004 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
C19orf48-211ENST00000599004 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
C19orf48-211ENST00000599004 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
C19orf48-211ENST00000599004 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
C19orf48-211ENST00000599004 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
C19orf48-211ENST00000599004 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
C19orf48-211ENST00000599004 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
C19orf48-211ENST00000599004 DCAF1Q9Y4B6 1507 aa25.09■■□□□ 1.61
C19orf48-211ENST00000599004 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
C19orf48-211ENST00000599004 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
C19orf48-211ENST00000599004 CUX2O14529 1486 aa24.36■■□□□ 1.49
C19orf48-211ENST00000599004 ERCC6Q03468 1493 aa24.25■■□□□ 1.47
C19orf48-211ENST00000599004 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
C19orf48-211ENST00000599004 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
C19orf48-211ENST00000599004 NESP48681 1621 aa23.92■■□□□ 1.42
C19orf48-211ENST00000599004 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
C19orf48-211ENST00000599004 HMGXB3Q12766 1538 aa23.91■■□□□ 1.42
C19orf48-211ENST00000599004 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
C19orf48-211ENST00000599004 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
C19orf48-211ENST00000599004 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
C19orf48-211ENST00000599004 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
C19orf48-211ENST00000599004 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
C19orf48-211ENST00000599004 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
C19orf48-211ENST00000599004 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
C19orf48-211ENST00000599004 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
C19orf48-211ENST00000599004 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
C19orf48-211ENST00000599004 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
C19orf48-211ENST00000599004 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
C19orf48-211ENST00000599004 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
C19orf48-211ENST00000599004 WDR62O43379 1518 aa23.34■■□□□ 1.33
C19orf48-211ENST00000599004 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
C19orf48-211ENST00000599004 OSCARQ8IYS5 282 aa23.18■■□□□ 1.3
C19orf48-211ENST00000599004 WIZO95785 1651 aa23.14■■□□□ 1.29
C19orf48-211ENST00000599004 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
C19orf48-211ENST00000599004 CFTRP13569 1480 aa23.01■■□□□ 1.27
C19orf48-211ENST00000599004 URB2Q14146 1524 aaKnown RBP22.96■■□□□ 1.27
C19orf48-211ENST00000599004 RIMBP3CA6NJZ7 1639 aa22.92■■□□□ 1.26
C19orf48-211ENST00000599004 RIMBP3BA6NNM3 1639 aa22.92■■□□□ 1.26
C19orf48-211ENST00000599004 RIMBP3Q9UFD9 1639 aa22.92■■□□□ 1.26
C19orf48-211ENST00000599004 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
C19orf48-211ENST00000599004 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
C19orf48-211ENST00000599004 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
C19orf48-211ENST00000599004 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
C19orf48-211ENST00000599004 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
C19orf48-211ENST00000599004 PRDM2Q13029 1718 aa22.75■■□□□ 1.23
C19orf48-211ENST00000599004 CYB5RLQ6IPT4 315 aa22.67■■□□□ 1.22
C19orf48-211ENST00000599004 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
C19orf48-211ENST00000599004 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
C19orf48-211ENST00000599004 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
C19orf48-211ENST00000599004 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
C19orf48-211ENST00000599004 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
C19orf48-211ENST00000599004 CHD1O14646 1710 aa22.55■■□□□ 1.2
C19orf48-211ENST00000599004 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
C19orf48-211ENST00000599004 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
C19orf48-211ENST00000599004 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19not detected■■■■□ 26.1
C19orf48-211ENST00000599004 FBLN2P98095 1184 aa22.48■■□□□ 1.19
C19orf48-211ENST00000599004 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
C19orf48-211ENST00000599004 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
C19orf48-211ENST00000599004 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
C19orf48-211ENST00000599004 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
C19orf48-211ENST00000599004 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
C19orf48-211ENST00000599004 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
C19orf48-211ENST00000599004 SOGA1O94964 1423 aa22.26■■□□□ 1.15
C19orf48-211ENST00000599004 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
C19orf48-211ENST00000599004 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
C19orf48-211ENST00000599004 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
C19orf48-211ENST00000599004 WDR97A6NE52 1622 aa22.2■■□□□ 1.15
C19orf48-211ENST00000599004 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
C19orf48-211ENST00000599004 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
C19orf48-211ENST00000599004 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
C19orf48-211ENST00000599004 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
C19orf48-211ENST00000599004 GAPVD1Q14C86 1478 aa22.08■■□□□ 1.12
C19orf48-211ENST00000599004 CUX1P39880 1505 aa22.06■■□□□ 1.12
C19orf48-211ENST00000599004 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
C19orf48-211ENST00000599004 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.09
C19orf48-211ENST00000599004 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
C19orf48-211ENST00000599004 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
C19orf48-211ENST00000599004 GRIN2AQ12879 1464 aa21.84■■□□□ 1.09
C19orf48-211ENST00000599004 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
C19orf48-211ENST00000599004 NUP160Q12769 1436 aa21.78■■□□□ 1.08
C19orf48-211ENST00000599004 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
C19orf48-211ENST00000599004 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
C19orf48-211ENST00000599004 KIF13AQ9H1H9 1805 aa21.73■■□□□ 1.07
C19orf48-211ENST00000599004 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
C19orf48-211ENST00000599004 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
C19orf48-211ENST00000599004 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
C19orf48-211ENST00000599004 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
C19orf48-211ENST00000599004 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
C19orf48-211ENST00000599004 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
C19orf48-211ENST00000599004 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
C19orf48-211ENST00000599004 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms