RNA–Protein interactions for RNA: ENST00000307979.7

SNAPC5-201, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAPC5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-201ENST00000307979 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
SNAPC5-201ENST00000307979 CCDC180Q9P1Z9 1646 aa25.2■■□□□ 1.62
SNAPC5-201ENST00000307979 ABCC9O60706 1549 aa24.75■■□□□ 1.55
SNAPC5-201ENST00000307979 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
SNAPC5-201ENST00000307979 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
SNAPC5-201ENST00000307979 NACADO15069 1562 aa23.74■■□□□ 1.39
SNAPC5-201ENST00000307979 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
SNAPC5-201ENST00000307979 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
SNAPC5-201ENST00000307979 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
SNAPC5-201ENST00000307979 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
SNAPC5-201ENST00000307979 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
SNAPC5-201ENST00000307979 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
SNAPC5-201ENST00000307979 SCRIBQ14160 1630 aa23■■□□□ 1.27
SNAPC5-201ENST00000307979 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
SNAPC5-201ENST00000307979 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
SNAPC5-201ENST00000307979 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
SNAPC5-201ENST00000307979 CC2D2AQ9P2K1 1620 aa22.34■■□□□ 1.17
SNAPC5-201ENST00000307979 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
SNAPC5-201ENST00000307979 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
SNAPC5-201ENST00000307979 SMARCA4P51532 1647 aa22■■□□□ 1.11
SNAPC5-201ENST00000307979 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
SNAPC5-201ENST00000307979 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
SNAPC5-201ENST00000307979 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
SNAPC5-201ENST00000307979 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
SNAPC5-201ENST00000307979 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
SNAPC5-201ENST00000307979 PEG3Q9GZU2 1588 aa21.78■■□□□ 1.08
SNAPC5-201ENST00000307979 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
SNAPC5-201ENST00000307979 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
SNAPC5-201ENST00000307979 WIZO95785 1651 aa21.58■■□□□ 1.05
SNAPC5-201ENST00000307979 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
SNAPC5-201ENST00000307979 NESP48681 1621 aa21.37■■□□□ 1.01
SNAPC5-201ENST00000307979 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
SNAPC5-201ENST00000307979 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
SNAPC5-201ENST00000307979 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
SNAPC5-201ENST00000307979 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
SNAPC5-201ENST00000307979 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
SNAPC5-201ENST00000307979 CFTRP13569 1480 aa21.14■□□□□ 0.98
SNAPC5-201ENST00000307979 CUX2O14529 1486 aa21.13■□□□□ 0.97
SNAPC5-201ENST00000307979 SUPT5HO00267 1087 aaKnown RBP21.09■□□□□ 0.97
SNAPC5-201ENST00000307979 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.96
SNAPC5-201ENST00000307979 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
SNAPC5-201ENST00000307979 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
SNAPC5-201ENST00000307979 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
SNAPC5-201ENST00000307979 MRC2Q9UBG0 1479 aa21■□□□□ 0.95
SNAPC5-201ENST00000307979 WDR62O43379 1518 aa20.9■□□□□ 0.94
SNAPC5-201ENST00000307979 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
SNAPC5-201ENST00000307979 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
SNAPC5-201ENST00000307979 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
SNAPC5-201ENST00000307979 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SNAPC5-201ENST00000307979 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
SNAPC5-201ENST00000307979 IFT140Q96RY7 1462 aa20.59■□□□□ 0.89
SNAPC5-201ENST00000307979 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
SNAPC5-201ENST00000307979 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
SNAPC5-201ENST00000307979 CUX1P39880 1505 aa20.49■□□□□ 0.87
SNAPC5-201ENST00000307979 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
SNAPC5-201ENST00000307979 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
SNAPC5-201ENST00000307979 SOGA1O94964 1423 aa20.45■□□□□ 0.86
SNAPC5-201ENST00000307979 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
SNAPC5-201ENST00000307979 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
SNAPC5-201ENST00000307979 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
SNAPC5-201ENST00000307979 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
SNAPC5-201ENST00000307979 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNAPC5-201ENST00000307979 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
SNAPC5-201ENST00000307979 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
SNAPC5-201ENST00000307979 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
SNAPC5-201ENST00000307979 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
SNAPC5-201ENST00000307979 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
SNAPC5-201ENST00000307979 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
SNAPC5-201ENST00000307979 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
SNAPC5-201ENST00000307979 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
SNAPC5-201ENST00000307979 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
SNAPC5-201ENST00000307979 FBLN2P98095 1184 aa20.18■□□□□ 0.82
SNAPC5-201ENST00000307979 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
SNAPC5-201ENST00000307979 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
SNAPC5-201ENST00000307979 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
SNAPC5-201ENST00000307979 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
SNAPC5-201ENST00000307979 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
SNAPC5-201ENST00000307979 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
SNAPC5-201ENST00000307979 CHD1O14646 1710 aa20.07■□□□□ 0.8
SNAPC5-201ENST00000307979 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
SNAPC5-201ENST00000307979 KIF27Q86VH2 1401 aa20■□□□□ 0.79
SNAPC5-201ENST00000307979 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
SNAPC5-201ENST00000307979 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
SNAPC5-201ENST00000307979 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
SNAPC5-201ENST00000307979 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
SNAPC5-201ENST00000307979 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
SNAPC5-201ENST00000307979 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
SNAPC5-201ENST00000307979 IGF1RP08069 1367 aa19.89■□□□□ 0.77
SNAPC5-201ENST00000307979 RIMBP3CA6NJZ7 1639 aa19.87■□□□□ 0.77
SNAPC5-201ENST00000307979 RIMBP3BA6NNM3 1639 aa19.87■□□□□ 0.77
SNAPC5-201ENST00000307979 RIMBP3Q9UFD9 1639 aa19.87■□□□□ 0.77
SNAPC5-201ENST00000307979 NUP160Q12769 1436 aa19.85■□□□□ 0.77
SNAPC5-201ENST00000307979 CUL7Q14999 1698 aa19.81■□□□□ 0.76
SNAPC5-201ENST00000307979 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
SNAPC5-201ENST00000307979 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
SNAPC5-201ENST00000307979 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
SNAPC5-201ENST00000307979 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
SNAPC5-201ENST00000307979 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
SNAPC5-201ENST00000307979 JPH4Q96JJ6 628 aa19.68■□□□□ 0.74
SNAPC5-201ENST00000307979 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms