RNA–Protein interactions for RNA: ENST00000422090.2

NUP62-202, Transcript of nucleoporin 62, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP62, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-202ENST00000422090 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
NUP62-202ENST00000422090 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
NUP62-202ENST00000422090 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
NUP62-202ENST00000422090 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
NUP62-202ENST00000422090 HRCP23327 699 aa16.99■□□□□ 0.31
NUP62-202ENST00000422090 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
NUP62-202ENST00000422090 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
NUP62-202ENST00000422090 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
NUP62-202ENST00000422090 PCGF6Q9BYE7 350 aa16.7■□□□□ 0.26
NUP62-202ENST00000422090 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
NUP62-202ENST00000422090 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
NUP62-202ENST00000422090 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
NUP62-202ENST00000422090 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
NUP62-202ENST00000422090 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
NUP62-202ENST00000422090 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
NUP62-202ENST00000422090 MYT1Q01538 1121 aa16.06■□□□□ 0.16
NUP62-202ENST00000422090 TTBK1Q5TCY1 1321 aaPredicted RBP15.91■□□□□ 0.14
NUP62-202ENST00000422090 TRIM26Q12899 539 aaPredicted RBP15.89■□□□□ 0.13
NUP62-202ENST00000422090 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
NUP62-202ENST00000422090 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
NUP62-202ENST00000422090 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.12
NUP62-202ENST00000422090 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.12
NUP62-202ENST00000422090 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.11
NUP62-202ENST00000422090 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
NUP62-202ENST00000422090 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
NUP62-202ENST00000422090 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
NUP62-202ENST00000422090 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
NUP62-202ENST00000422090 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.07
NUP62-202ENST00000422090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
NUP62-202ENST00000422090 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
NUP62-202ENST00000422090 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
NUP62-202ENST00000422090 YTHDC1Q96MU7 727 aaKnown RBP15.39■□□□□ 0.05
NUP62-202ENST00000422090 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
NUP62-202ENST00000422090 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
NUP62-202ENST00000422090 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
NUP62-202ENST00000422090 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
NUP62-202ENST00000422090 SCRIBQ14160 1630 aa15.06■□□□□ 0
NUP62-202ENST00000422090 ABCC9O60706 1549 aa15.05■□□□□ 0
NUP62-202ENST00000422090 APLP2Q06481 763 aa15.04■□□□□ -0
NUP62-202ENST00000422090 RSF1Q96T23 1441 aaPredicted RBP15.02□□□□□ -0.01
NUP62-202ENST00000422090 MIER1Q8N108 512 aa15.02□□□□□ -0.01
NUP62-202ENST00000422090 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
NUP62-202ENST00000422090 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
NUP62-202ENST00000422090 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.02
NUP62-202ENST00000422090 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
NUP62-202ENST00000422090 ITGAEP38570 1179 aa14.87□□□□□ -0.03
NUP62-202ENST00000422090 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
NUP62-202ENST00000422090 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
NUP62-202ENST00000422090 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
NUP62-202ENST00000422090 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
NUP62-202ENST00000422090 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
NUP62-202ENST00000422090 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
NUP62-202ENST00000422090 BCANQ96GW7 911 aa14.72□□□□□ -0.05
NUP62-202ENST00000422090 MROH2BQ7Z745 1585 aa14.62□□□□□ -0.07
NUP62-202ENST00000422090 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
NUP62-202ENST00000422090 SOGA1O94964 1423 aa14.59□□□□□ -0.07
NUP62-202ENST00000422090 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
NUP62-202ENST00000422090 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
NUP62-202ENST00000422090 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
NUP62-202ENST00000422090 CCDC88BA6NC98 1476 aa14.52□□□□□ -0.08
NUP62-202ENST00000422090 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
NUP62-202ENST00000422090 FKBP8Q14318 412 aa14.49□□□□□ -0.09
NUP62-202ENST00000422090 WIZO95785 1651 aa14.48□□□□□ -0.09
NUP62-202ENST00000422090 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
NUP62-202ENST00000422090 KCNH8Q96L42 1107 aa14.45□□□□□ -0.1
NUP62-202ENST00000422090 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
NUP62-202ENST00000422090 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
NUP62-202ENST00000422090 MSH5O43196 834 aa14.42□□□□□ -0.1
NUP62-202ENST00000422090 CNGB1Q14028 1251 aaPredicted RBP14.41□□□□□ -0.1
NUP62-202ENST00000422090 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
NUP62-202ENST00000422090 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
NUP62-202ENST00000422090 TNIKQ9UKE5 1360 aa14.38□□□□□ -0.11
NUP62-202ENST00000422090 CLIP1P30622 1438 aa14.37□□□□□ -0.11
NUP62-202ENST00000422090 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
NUP62-202ENST00000422090 NEFLP07196 543 aa14.32□□□□□ -0.12
NUP62-202ENST00000422090 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
NUP62-202ENST00000422090 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
NUP62-202ENST00000422090 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
NUP62-202ENST00000422090 DEKP35659 375 aaKnown RBP14.27□□□□□ -0.13
NUP62-202ENST00000422090 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
NUP62-202ENST00000422090 TRIM52Q96A61 297 aa14.27□□□□□ -0.13
NUP62-202ENST00000422090 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
NUP62-202ENST00000422090 NACADO15069 1562 aa14.23□□□□□ -0.13
NUP62-202ENST00000422090 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
NUP62-202ENST00000422090 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
NUP62-202ENST00000422090 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
NUP62-202ENST00000422090 POLR3GLQ9BT43 218 aa14.19□□□□□ -0.14
NUP62-202ENST00000422090 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
NUP62-202ENST00000422090 ARID3CA6NKF2 412 aa14.17□□□□□ -0.14
NUP62-202ENST00000422090 IRX6P78412 446 aaPredicted RBP14.16□□□□□ -0.14
NUP62-202ENST00000422090 NBR1Q14596 966 aa14.16□□□□□ -0.14
NUP62-202ENST00000422090 EEA1Q15075 1411 aa14.14□□□□□ -0.15
NUP62-202ENST00000422090 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
NUP62-202ENST00000422090 CDK11AQ9UQ88 783 aaPredicted RBP14.12□□□□□ -0.15
NUP62-202ENST00000422090 KCNA4P22459 653 aa14.11□□□□□ -0.15
NUP62-202ENST00000422090 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
NUP62-202ENST00000422090 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
NUP62-202ENST00000422090 ANP32CO43423 234 aa14.1□□□□□ -0.15
NUP62-202ENST00000422090 SENP3-EIF4A1A0A087X0R7 540 aa14.09□□□□□ -0.15
NUP62-202ENST00000422090 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms