RNA–Protein interactions for RNA: ENST00000600583.5

NUP62-220, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-220ENST00000600583 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
NUP62-220ENST00000600583 ABCC9O60706 1549 aa29.3■■■□□ 2.28
NUP62-220ENST00000600583 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
NUP62-220ENST00000600583 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
NUP62-220ENST00000600583 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
NUP62-220ENST00000600583 PABPN1Q86U42 306 aaKnown RBP eCLIP27.21■■□□□ 1.95
NUP62-220ENST00000600583 NACADO15069 1562 aa27.2■■□□□ 1.94
NUP62-220ENST00000600583 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
NUP62-220ENST00000600583 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
NUP62-220ENST00000600583 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
NUP62-220ENST00000600583 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
NUP62-220ENST00000600583 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
NUP62-220ENST00000600583 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
NUP62-220ENST00000600583 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
NUP62-220ENST00000600583 DNAJC5Q9H3Z4 198 aa26.26■■□□□ 1.79
NUP62-220ENST00000600583 EIF4G1Q04637 1599 aaKnown RBP26.22■■□□□ 1.79
NUP62-220ENST00000600583 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
NUP62-220ENST00000600583 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
NUP62-220ENST00000600583 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
NUP62-220ENST00000600583 CUX2O14529 1486 aa25.44■■□□□ 1.66
NUP62-220ENST00000600583 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
NUP62-220ENST00000600583 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
NUP62-220ENST00000600583 NESP48681 1621 aa25.06■■□□□ 1.6
NUP62-220ENST00000600583 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
NUP62-220ENST00000600583 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
NUP62-220ENST00000600583 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
NUP62-220ENST00000600583 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
NUP62-220ENST00000600583 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
NUP62-220ENST00000600583 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
NUP62-220ENST00000600583 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
NUP62-220ENST00000600583 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
NUP62-220ENST00000600583 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
NUP62-220ENST00000600583 PEG3Q9GZU2 1588 aa24.6■■□□□ 1.53
NUP62-220ENST00000600583 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
NUP62-220ENST00000600583 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
NUP62-220ENST00000600583 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
NUP62-220ENST00000600583 WDR62O43379 1518 aa24.36■■□□□ 1.49
NUP62-220ENST00000600583 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
NUP62-220ENST00000600583 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
NUP62-220ENST00000600583 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
NUP62-220ENST00000600583 CEP164Q9UPV0 1460 aa24.1■■□□□ 1.45
NUP62-220ENST00000600583 WIZO95785 1651 aa24.09■■□□□ 1.45
NUP62-220ENST00000600583 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
NUP62-220ENST00000600583 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
NUP62-220ENST00000600583 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
NUP62-220ENST00000600583 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
NUP62-220ENST00000600583 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
NUP62-220ENST00000600583 CFTRP13569 1480 aa23.97■■□□□ 1.43
NUP62-220ENST00000600583 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
NUP62-220ENST00000600583 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
NUP62-220ENST00000600583 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
NUP62-220ENST00000600583 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
NUP62-220ENST00000600583 TOP2AP11388 1531 aaKnown RBP23.67■■□□□ 1.38
NUP62-220ENST00000600583 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
NUP62-220ENST00000600583 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
NUP62-220ENST00000600583 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
NUP62-220ENST00000600583 TOPBP1Q92547 1522 aa23.58■■□□□ 1.36
NUP62-220ENST00000600583 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
NUP62-220ENST00000600583 CHD1O14646 1710 aa23.53■■□□□ 1.36
NUP62-220ENST00000600583 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
NUP62-220ENST00000600583 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.351e-7■■■□□ 18.3
NUP62-220ENST00000600583 CCDC88BA6NC98 1476 aa23.48■■□□□ 1.35
NUP62-220ENST00000600583 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
NUP62-220ENST00000600583 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
NUP62-220ENST00000600583 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
NUP62-220ENST00000600583 FBLN2P98095 1184 aa23.32■■□□□ 1.32
NUP62-220ENST00000600583 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
NUP62-220ENST00000600583 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
NUP62-220ENST00000600583 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
NUP62-220ENST00000600583 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
NUP62-220ENST00000600583 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
NUP62-220ENST00000600583 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
NUP62-220ENST00000600583 SOGA1O94964 1423 aa23.14■■□□□ 1.29
NUP62-220ENST00000600583 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
NUP62-220ENST00000600583 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
NUP62-220ENST00000600583 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
NUP62-220ENST00000600583 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
NUP62-220ENST00000600583 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
NUP62-220ENST00000600583 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
NUP62-220ENST00000600583 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
NUP62-220ENST00000600583 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
NUP62-220ENST00000600583 CUX1P39880 1505 aa22.98■■□□□ 1.27
NUP62-220ENST00000600583 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
NUP62-220ENST00000600583 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
NUP62-220ENST00000600583 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
NUP62-220ENST00000600583 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
NUP62-220ENST00000600583 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
NUP62-220ENST00000600583 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
NUP62-220ENST00000600583 NUP160Q12769 1436 aa22.72■■□□□ 1.23
NUP62-220ENST00000600583 GRIN2AQ12879 1464 aa22.72■■□□□ 1.23
NUP62-220ENST00000600583 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
NUP62-220ENST00000600583 ADAMTS12P58397 1594 aa22.64■■□□□ 1.22
NUP62-220ENST00000600583 KDM4FA0A1W2PPD8 638 aa22.57■■□□□ 1.2
NUP62-220ENST00000600583 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
NUP62-220ENST00000600583 ABCC10Q5T3U5 1492 aa22.51■■□□□ 1.19
NUP62-220ENST00000600583 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
NUP62-220ENST00000600583 ILDR1Q86SU0 546 aaPredicted RBP22.49■■□□□ 1.19
NUP62-220ENST00000600583 FAM69CQ0P6D2 419 aa22.48■■□□□ 1.19
NUP62-220ENST00000600583 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
NUP62-220ENST00000600583 DIP2BQ9P265 1576 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms