RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-222ENST00000600935 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
NUP62-222ENST00000600935 ABCC9O60706 1549 aa26.41■■□□□ 1.82
NUP62-222ENST00000600935 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
NUP62-222ENST00000600935 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
NUP62-222ENST00000600935 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
NUP62-222ENST00000600935 NACADO15069 1562 aa24.63■■□□□ 1.53
NUP62-222ENST00000600935 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
NUP62-222ENST00000600935 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
NUP62-222ENST00000600935 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
NUP62-222ENST00000600935 DCAF8L2P0C7V8 631 aa24.27■■□□□ 1.48
NUP62-222ENST00000600935 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
NUP62-222ENST00000600935 CC2D2AQ9P2K1 1620 aa23.86■■□□□ 1.41
NUP62-222ENST00000600935 CECR2Q9BXF3 1484 aa23.84■■□□□ 1.41
NUP62-222ENST00000600935 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
NUP62-222ENST00000600935 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
NUP62-222ENST00000600935 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
NUP62-222ENST00000600935 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
NUP62-222ENST00000600935 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
NUP62-222ENST00000600935 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
NUP62-222ENST00000600935 CUX2O14529 1486 aa22.96■■□□□ 1.27
NUP62-222ENST00000600935 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
NUP62-222ENST00000600935 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
NUP62-222ENST00000600935 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
NUP62-222ENST00000600935 NESP48681 1621 aa22.59■■□□□ 1.21
NUP62-222ENST00000600935 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
NUP62-222ENST00000600935 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
NUP62-222ENST00000600935 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
NUP62-222ENST00000600935 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
NUP62-222ENST00000600935 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
NUP62-222ENST00000600935 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
NUP62-222ENST00000600935 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
NUP62-222ENST00000600935 KIF21AQ7Z4S6 1674 aa22.29■■□□□ 1.16
NUP62-222ENST00000600935 BAZ1AQ9NRL2 1556 aaPredicted RBP22.26■■□□□ 1.15
NUP62-222ENST00000600935 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
NUP62-222ENST00000600935 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
NUP62-222ENST00000600935 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
NUP62-222ENST00000600935 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
NUP62-222ENST00000600935 WDR62O43379 1518 aa22.03■■□□□ 1.12
NUP62-222ENST00000600935 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
NUP62-222ENST00000600935 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
NUP62-222ENST00000600935 WIZO95785 1651 aa21.82■■□□□ 1.08
NUP62-222ENST00000600935 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
NUP62-222ENST00000600935 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
NUP62-222ENST00000600935 CFTRP13569 1480 aa21.69■■□□□ 1.06
NUP62-222ENST00000600935 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
NUP62-222ENST00000600935 RIMBP3CA6NJZ7 1639 aa21.63■■□□□ 1.05
NUP62-222ENST00000600935 RIMBP3BA6NNM3 1639 aa21.63■■□□□ 1.05
NUP62-222ENST00000600935 RIMBP3Q9UFD9 1639 aa21.63■■□□□ 1.05
NUP62-222ENST00000600935 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
NUP62-222ENST00000600935 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
NUP62-222ENST00000600935 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
NUP62-222ENST00000600935 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
NUP62-222ENST00000600935 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
NUP62-222ENST00000600935 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
NUP62-222ENST00000600935 EIF4G3O43432 1585 aaKnown RBP21.34■■□□□ 1.01
NUP62-222ENST00000600935 TOPBP1Q92547 1522 aa21.33■■□□□ 1
NUP62-222ENST00000600935 CYB5RLQ6IPT4 315 aa21.3■■□□□ 1
NUP62-222ENST00000600935 ARAP1Q96P48 1450 aa21.28■■□□□ 1
NUP62-222ENST00000600935 CHD1O14646 1710 aa21.27■■□□□ 1
NUP62-222ENST00000600935 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
NUP62-222ENST00000600935 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
NUP62-222ENST00000600935 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
NUP62-222ENST00000600935 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■□□ 18.3
NUP62-222ENST00000600935 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
NUP62-222ENST00000600935 TRHP20396 242 aaPredicted RBP21.17■□□□□ 0.98
NUP62-222ENST00000600935 POLA1P09884 1462 aaPredicted RBP21.08■□□□□ 0.97
NUP62-222ENST00000600935 FBLN2P98095 1184 aa21.05■□□□□ 0.96
NUP62-222ENST00000600935 CLASP1Q7Z460 1538 aa21.04■□□□□ 0.96
NUP62-222ENST00000600935 RAD54L2Q9Y4B4 1467 aa21.01■□□□□ 0.95
NUP62-222ENST00000600935 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
NUP62-222ENST00000600935 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
NUP62-222ENST00000600935 SOGA1O94964 1423 aa20.93■□□□□ 0.94
NUP62-222ENST00000600935 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
NUP62-222ENST00000600935 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
NUP62-222ENST00000600935 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
NUP62-222ENST00000600935 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
NUP62-222ENST00000600935 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
NUP62-222ENST00000600935 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
NUP62-222ENST00000600935 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
NUP62-222ENST00000600935 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
NUP62-222ENST00000600935 CUX1P39880 1505 aa20.8■□□□□ 0.92
NUP62-222ENST00000600935 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
NUP62-222ENST00000600935 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
NUP62-222ENST00000600935 ERCC6L2Q5T890 1561 aa20.69■□□□□ 0.9
NUP62-222ENST00000600935 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
NUP62-222ENST00000600935 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
NUP62-222ENST00000600935 CEP170Q5SW79 1584 aa20.57■□□□□ 0.88
NUP62-222ENST00000600935 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
NUP62-222ENST00000600935 NUP160Q12769 1436 aa20.54■□□□□ 0.88
NUP62-222ENST00000600935 KIF13AQ9H1H9 1805 aa20.54■□□□□ 0.88
NUP62-222ENST00000600935 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
NUP62-222ENST00000600935 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
NUP62-222ENST00000600935 FHAD1B1AJZ9 1412 aa20.39■□□□□ 0.85
NUP62-222ENST00000600935 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
NUP62-222ENST00000600935 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
NUP62-222ENST00000600935 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
NUP62-222ENST00000600935 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
NUP62-222ENST00000600935 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
NUP62-222ENST00000600935 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
NUP62-222ENST00000600935 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms