RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
SNAPC5-204ENST00000562411 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
SNAPC5-204ENST00000562411 ABCC9O60706 1549 aa23.28■■□□□ 1.32
SNAPC5-204ENST00000562411 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
SNAPC5-204ENST00000562411 NACADO15069 1562 aa22.36■■□□□ 1.17
SNAPC5-204ENST00000562411 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
SNAPC5-204ENST00000562411 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
SNAPC5-204ENST00000562411 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
SNAPC5-204ENST00000562411 DCAF1Q9Y4B6 1507 aa22.12■■□□□ 1.13
SNAPC5-204ENST00000562411 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
SNAPC5-204ENST00000562411 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
SNAPC5-204ENST00000562411 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
SNAPC5-204ENST00000562411 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
SNAPC5-204ENST00000562411 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
SNAPC5-204ENST00000562411 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
SNAPC5-204ENST00000562411 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
SNAPC5-204ENST00000562411 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
SNAPC5-204ENST00000562411 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
SNAPC5-204ENST00000562411 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
SNAPC5-204ENST00000562411 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
SNAPC5-204ENST00000562411 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
SNAPC5-204ENST00000562411 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
SNAPC5-204ENST00000562411 ATAD2BQ9ULI0 1458 aa20.62■□□□□ 0.89
SNAPC5-204ENST00000562411 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
SNAPC5-204ENST00000562411 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
SNAPC5-204ENST00000562411 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
SNAPC5-204ENST00000562411 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
SNAPC5-204ENST00000562411 WIZO95785 1651 aa20.46■□□□□ 0.87
SNAPC5-204ENST00000562411 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
SNAPC5-204ENST00000562411 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
SNAPC5-204ENST00000562411 NESP48681 1621 aa20.16■□□□□ 0.82
SNAPC5-204ENST00000562411 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
SNAPC5-204ENST00000562411 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
SNAPC5-204ENST00000562411 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
SNAPC5-204ENST00000562411 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.79
SNAPC5-204ENST00000562411 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
SNAPC5-204ENST00000562411 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
SNAPC5-204ENST00000562411 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
SNAPC5-204ENST00000562411 PDS5BQ9NTI5 1447 aa19.9■□□□□ 0.78
SNAPC5-204ENST00000562411 CFTRP13569 1480 aa19.88■□□□□ 0.77
SNAPC5-204ENST00000562411 CUX2O14529 1486 aa19.85■□□□□ 0.77
SNAPC5-204ENST00000562411 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
SNAPC5-204ENST00000562411 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
SNAPC5-204ENST00000562411 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
SNAPC5-204ENST00000562411 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
SNAPC5-204ENST00000562411 WDR62O43379 1518 aa19.73■□□□□ 0.75
SNAPC5-204ENST00000562411 URB2Q14146 1524 aaKnown RBP19.62■□□□□ 0.73
SNAPC5-204ENST00000562411 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
SNAPC5-204ENST00000562411 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
SNAPC5-204ENST00000562411 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
SNAPC5-204ENST00000562411 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
SNAPC5-204ENST00000562411 CUX1P39880 1505 aa19.37■□□□□ 0.69
SNAPC5-204ENST00000562411 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
SNAPC5-204ENST00000562411 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
SNAPC5-204ENST00000562411 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
SNAPC5-204ENST00000562411 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
SNAPC5-204ENST00000562411 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
SNAPC5-204ENST00000562411 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
SNAPC5-204ENST00000562411 BIVM-ERCC5R4GMW8 1640 aa19.26■□□□□ 0.67
SNAPC5-204ENST00000562411 WDR97A6NE52 1622 aa19.25■□□□□ 0.67
SNAPC5-204ENST00000562411 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
SNAPC5-204ENST00000562411 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
SNAPC5-204ENST00000562411 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
SNAPC5-204ENST00000562411 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SNAPC5-204ENST00000562411 SOGA1O94964 1423 aa19.17■□□□□ 0.66
SNAPC5-204ENST00000562411 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNAPC5-204ENST00000562411 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
SNAPC5-204ENST00000562411 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
SNAPC5-204ENST00000562411 CHD1O14646 1710 aa19.09■□□□□ 0.65
SNAPC5-204ENST00000562411 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
SNAPC5-204ENST00000562411 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
SNAPC5-204ENST00000562411 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
SNAPC5-204ENST00000562411 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
SNAPC5-204ENST00000562411 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
SNAPC5-204ENST00000562411 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
SNAPC5-204ENST00000562411 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
SNAPC5-204ENST00000562411 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
SNAPC5-204ENST00000562411 ERICH3Q5RHP9 1530 aa18.87■□□□□ 0.61
SNAPC5-204ENST00000562411 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
SNAPC5-204ENST00000562411 FBLN2P98095 1184 aa18.86■□□□□ 0.61
SNAPC5-204ENST00000562411 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
SNAPC5-204ENST00000562411 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
SNAPC5-204ENST00000562411 RIMBP3CA6NJZ7 1639 aa18.79■□□□□ 0.6
SNAPC5-204ENST00000562411 RIMBP3BA6NNM3 1639 aa18.79■□□□□ 0.6
SNAPC5-204ENST00000562411 RIMBP3Q9UFD9 1639 aa18.79■□□□□ 0.6
SNAPC5-204ENST00000562411 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
SNAPC5-204ENST00000562411 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
SNAPC5-204ENST00000562411 CUL7Q14999 1698 aa18.78■□□□□ 0.6
SNAPC5-204ENST00000562411 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
SNAPC5-204ENST00000562411 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
SNAPC5-204ENST00000562411 CEP170Q5SW79 1584 aa18.75■□□□□ 0.59
SNAPC5-204ENST00000562411 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
SNAPC5-204ENST00000562411 NUP160Q12769 1436 aa18.67■□□□□ 0.58
SNAPC5-204ENST00000562411 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
SNAPC5-204ENST00000562411 IGF1RP08069 1367 aa18.62■□□□□ 0.57
SNAPC5-204ENST00000562411 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
SNAPC5-204ENST00000562411 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
SNAPC5-204ENST00000562411 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
SNAPC5-204ENST00000562411 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
SNAPC5-204ENST00000562411 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms