RNA–Protein interactions for RNA: ENST00000600373.5

C19orf48-212, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-212ENST00000600373 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
C19orf48-212ENST00000600373 ABCC9O60706 1549 aa31.39■■■□□ 2.61
C19orf48-212ENST00000600373 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
C19orf48-212ENST00000600373 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
C19orf48-212ENST00000600373 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
C19orf48-212ENST00000600373 NACADO15069 1562 aa29.45■■■□□ 2.31
C19orf48-212ENST00000600373 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
C19orf48-212ENST00000600373 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.27
C19orf48-212ENST00000600373 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.23
C19orf48-212ENST00000600373 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
C19orf48-212ENST00000600373 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
C19orf48-212ENST00000600373 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
C19orf48-212ENST00000600373 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
C19orf48-212ENST00000600373 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
C19orf48-212ENST00000600373 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
C19orf48-212ENST00000600373 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
C19orf48-212ENST00000600373 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
C19orf48-212ENST00000600373 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
C19orf48-212ENST00000600373 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
C19orf48-212ENST00000600373 CUX2O14529 1486 aa27.24■■□□□ 1.95
C19orf48-212ENST00000600373 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
C19orf48-212ENST00000600373 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
C19orf48-212ENST00000600373 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
C19orf48-212ENST00000600373 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
C19orf48-212ENST00000600373 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
C19orf48-212ENST00000600373 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
C19orf48-212ENST00000600373 NESP48681 1621 aa26.84■■□□□ 1.89
C19orf48-212ENST00000600373 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
C19orf48-212ENST00000600373 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
C19orf48-212ENST00000600373 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
C19orf48-212ENST00000600373 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
C19orf48-212ENST00000600373 THOC2Q8NI27 1593 aaKnown RBP26.62■■□□□ 1.85
C19orf48-212ENST00000600373 PDS5BQ9NTI5 1447 aa26.54■■□□□ 1.84
C19orf48-212ENST00000600373 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
C19orf48-212ENST00000600373 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
C19orf48-212ENST00000600373 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
C19orf48-212ENST00000600373 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
C19orf48-212ENST00000600373 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
C19orf48-212ENST00000600373 WDR62O43379 1518 aa26.22■■□□□ 1.79
C19orf48-212ENST00000600373 WIZO95785 1651 aa26.12■■□□□ 1.77
C19orf48-212ENST00000600373 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
C19orf48-212ENST00000600373 FANCD2Q9BXW9 1451 aa26.05■■□□□ 1.76
C19orf48-212ENST00000600373 CFTRP13569 1480 aa25.99■■□□□ 1.75
C19orf48-212ENST00000600373 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
C19orf48-212ENST00000600373 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
C19orf48-212ENST00000600373 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.73
C19orf48-212ENST00000600373 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
C19orf48-212ENST00000600373 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
C19orf48-212ENST00000600373 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.68
C19orf48-212ENST00000600373 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
C19orf48-212ENST00000600373 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
C19orf48-212ENST00000600373 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
C19orf48-212ENST00000600373 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
C19orf48-212ENST00000600373 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
C19orf48-212ENST00000600373 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
C19orf48-212ENST00000600373 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
C19orf48-212ENST00000600373 ARHGEF11O15085 1522 aa25.48■■□□□ 1.67
C19orf48-212ENST00000600373 CYB5RLQ6IPT4 315 aa25.39■■□□□ 1.66
C19orf48-212ENST00000600373 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
C19orf48-212ENST00000600373 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
C19orf48-212ENST00000600373 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.65not detected■■■■□ 26.1
C19orf48-212ENST00000600373 TARBP1Q13395 1621 aaKnown RBP25.27■■□□□ 1.64
C19orf48-212ENST00000600373 FBLN2P98095 1184 aa25.27■■□□□ 1.64
C19orf48-212ENST00000600373 TRHP20396 242 aaPredicted RBP25.23■■□□□ 1.63
C19orf48-212ENST00000600373 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
C19orf48-212ENST00000600373 CHD1O14646 1710 aa25.21■■□□□ 1.63
C19orf48-212ENST00000600373 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
C19orf48-212ENST00000600373 SOGA1O94964 1423 aa25.14■■□□□ 1.62
C19orf48-212ENST00000600373 RAD54L2Q9Y4B4 1467 aa25.14■■□□□ 1.61
C19orf48-212ENST00000600373 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
C19orf48-212ENST00000600373 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
C19orf48-212ENST00000600373 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
C19orf48-212ENST00000600373 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
C19orf48-212ENST00000600373 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
C19orf48-212ENST00000600373 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
C19orf48-212ENST00000600373 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
C19orf48-212ENST00000600373 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
C19orf48-212ENST00000600373 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
C19orf48-212ENST00000600373 CUX1P39880 1505 aa24.91■■□□□ 1.58
C19orf48-212ENST00000600373 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
C19orf48-212ENST00000600373 GAPVD1Q14C86 1478 aa24.82■■□□□ 1.56
C19orf48-212ENST00000600373 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
C19orf48-212ENST00000600373 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
C19orf48-212ENST00000600373 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
C19orf48-212ENST00000600373 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
C19orf48-212ENST00000600373 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
C19orf48-212ENST00000600373 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
C19orf48-212ENST00000600373 NUP160Q12769 1436 aa24.56■■□□□ 1.52
C19orf48-212ENST00000600373 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
C19orf48-212ENST00000600373 ADAMTS12P58397 1594 aa24.51■■□□□ 1.51
C19orf48-212ENST00000600373 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
C19orf48-212ENST00000600373 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
C19orf48-212ENST00000600373 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
C19orf48-212ENST00000600373 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
C19orf48-212ENST00000600373 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
C19orf48-212ENST00000600373 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
C19orf48-212ENST00000600373 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
C19orf48-212ENST00000600373 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
C19orf48-212ENST00000600373 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
C19orf48-212ENST00000600373 NPM1P06748 294 aaKnown RBP eCLIP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms