RNA–Protein interactions for RNA: ENST00000597723.5

NUP62-212, Transcript of nucleoporin 62, humanhuman

TSL 1 (best) BASIC

Gene NUP62, Length 1,824 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-212ENST00000597723 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
NUP62-212ENST00000597723 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.06
NUP62-212ENST00000597723 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
NUP62-212ENST00000597723 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
NUP62-212ENST00000597723 ABCC9O60706 1549 aa26.75■■□□□ 1.87
NUP62-212ENST00000597723 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
NUP62-212ENST00000597723 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
NUP62-212ENST00000597723 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
NUP62-212ENST00000597723 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
NUP62-212ENST00000597723 NACADO15069 1562 aa25.96■■□□□ 1.75
NUP62-212ENST00000597723 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
NUP62-212ENST00000597723 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
NUP62-212ENST00000597723 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
NUP62-212ENST00000597723 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
NUP62-212ENST00000597723 UNC13AQ9UPW8 1703 aa25.25■■□□□ 1.63
NUP62-212ENST00000597723 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
NUP62-212ENST00000597723 CECR2Q9BXF3 1484 aa25.05■■□□□ 1.6
NUP62-212ENST00000597723 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
NUP62-212ENST00000597723 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.59
NUP62-212ENST00000597723 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
NUP62-212ENST00000597723 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
NUP62-212ENST00000597723 HRCP23327 699 aa24.8■■□□□ 1.56
NUP62-212ENST00000597723 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
NUP62-212ENST00000597723 WIZO95785 1651 aa24.79■■□□□ 1.56
NUP62-212ENST00000597723 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
NUP62-212ENST00000597723 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
NUP62-212ENST00000597723 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
NUP62-212ENST00000597723 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
NUP62-212ENST00000597723 TOP2AP11388 1531 aaKnown RBP24.51■■□□□ 1.51
NUP62-212ENST00000597723 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
NUP62-212ENST00000597723 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
NUP62-212ENST00000597723 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
NUP62-212ENST00000597723 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
NUP62-212ENST00000597723 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
NUP62-212ENST00000597723 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
NUP62-212ENST00000597723 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
NUP62-212ENST00000597723 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
NUP62-212ENST00000597723 ABCC8Q09428 1581 aa24.08■■□□□ 1.44
NUP62-212ENST00000597723 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
NUP62-212ENST00000597723 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
NUP62-212ENST00000597723 EEA1Q15075 1411 aa24.02■■□□□ 1.44
NUP62-212ENST00000597723 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
NUP62-212ENST00000597723 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
NUP62-212ENST00000597723 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
NUP62-212ENST00000597723 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.41
NUP62-212ENST00000597723 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.4
NUP62-212ENST00000597723 SOGA1O94964 1423 aa23.82■■□□□ 1.4
NUP62-212ENST00000597723 CSRNP3Q8WYN3 585 aa23.8■■□□□ 1.4
NUP62-212ENST00000597723 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
NUP62-212ENST00000597723 GOLGA3Q08378 1498 aa23.72■■□□□ 1.39
NUP62-212ENST00000597723 SYNJ1O43426 1573 aa23.66■■□□□ 1.38
NUP62-212ENST00000597723 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
NUP62-212ENST00000597723 KIF21BO75037 1637 aa23.63■■□□□ 1.37
NUP62-212ENST00000597723 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
NUP62-212ENST00000597723 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
NUP62-212ENST00000597723 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
NUP62-212ENST00000597723 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
NUP62-212ENST00000597723 CFTRP13569 1480 aa23.46■■□□□ 1.35
NUP62-212ENST00000597723 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
NUP62-212ENST00000597723 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
NUP62-212ENST00000597723 CLIP1P30622 1438 aa23.37■■□□□ 1.33
NUP62-212ENST00000597723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
NUP62-212ENST00000597723 CUX1P39880 1505 aa23.31■■□□□ 1.32
NUP62-212ENST00000597723 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
NUP62-212ENST00000597723 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
NUP62-212ENST00000597723 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
NUP62-212ENST00000597723 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
NUP62-212ENST00000597723 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
NUP62-212ENST00000597723 NESP48681 1621 aa23.24■■□□□ 1.31
NUP62-212ENST00000597723 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
NUP62-212ENST00000597723 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
NUP62-212ENST00000597723 APLP2Q06481 763 aa23.2■■□□□ 1.3
NUP62-212ENST00000597723 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
NUP62-212ENST00000597723 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
NUP62-212ENST00000597723 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
NUP62-212ENST00000597723 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
NUP62-212ENST00000597723 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
NUP62-212ENST00000597723 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
NUP62-212ENST00000597723 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
NUP62-212ENST00000597723 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
NUP62-212ENST00000597723 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
NUP62-212ENST00000597723 HNRNPUL2Q1KMD3 747 aaKnown RBP22.92■■□□□ 1.26
NUP62-212ENST00000597723 CUX2O14529 1486 aa22.88■■□□□ 1.25
NUP62-212ENST00000597723 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
NUP62-212ENST00000597723 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
NUP62-212ENST00000597723 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
NUP62-212ENST00000597723 IGF1RP08069 1367 aa22.83■■□□□ 1.25
NUP62-212ENST00000597723 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
NUP62-212ENST00000597723 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
NUP62-212ENST00000597723 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
NUP62-212ENST00000597723 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
NUP62-212ENST00000597723 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
NUP62-212ENST00000597723 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
NUP62-212ENST00000597723 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
NUP62-212ENST00000597723 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
NUP62-212ENST00000597723 RRBP1Q9P2E9 1410 aaKnown RBP22.75■■□□□ 1.23
NUP62-212ENST00000597723 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
NUP62-212ENST00000597723 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
NUP62-212ENST00000597723 WDR62O43379 1518 aa22.72■■□□□ 1.23
NUP62-212ENST00000597723 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms