RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
RTN4IP1-201ENST00000369063 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
RTN4IP1-201ENST00000369063 ABCC9O60706 1549 aa31.9■■■□□ 2.7
RTN4IP1-201ENST00000369063 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
RTN4IP1-201ENST00000369063 NACADO15069 1562 aa30.74■■■□□ 2.51
RTN4IP1-201ENST00000369063 ZCCHC6Q5VYS8 1495 aaKnown RBP30.74■■■□□ 2.51
RTN4IP1-201ENST00000369063 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
RTN4IP1-201ENST00000369063 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
RTN4IP1-201ENST00000369063 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
RTN4IP1-201ENST00000369063 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
RTN4IP1-201ENST00000369063 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
RTN4IP1-201ENST00000369063 SCRIBQ14160 1630 aa29.84■■■□□ 2.37
RTN4IP1-201ENST00000369063 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
RTN4IP1-201ENST00000369063 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
RTN4IP1-201ENST00000369063 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
RTN4IP1-201ENST00000369063 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.23
RTN4IP1-201ENST00000369063 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
RTN4IP1-201ENST00000369063 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
RTN4IP1-201ENST00000369063 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
RTN4IP1-201ENST00000369063 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
RTN4IP1-201ENST00000369063 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
RTN4IP1-201ENST00000369063 ATAD2BQ9ULI0 1458 aa28.42■■■□□ 2.14
RTN4IP1-201ENST00000369063 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
RTN4IP1-201ENST00000369063 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
RTN4IP1-201ENST00000369063 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
RTN4IP1-201ENST00000369063 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
RTN4IP1-201ENST00000369063 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
RTN4IP1-201ENST00000369063 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
RTN4IP1-201ENST00000369063 WIZO95785 1651 aa28.1■■■□□ 2.09
RTN4IP1-201ENST00000369063 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
RTN4IP1-201ENST00000369063 NESP48681 1621 aa27.65■■■□□ 2.02
RTN4IP1-201ENST00000369063 LAMC3Q9Y6N6 1575 aa27.59■■■□□ 2.01
RTN4IP1-201ENST00000369063 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
RTN4IP1-201ENST00000369063 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
RTN4IP1-201ENST00000369063 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
RTN4IP1-201ENST00000369063 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
RTN4IP1-201ENST00000369063 CFTRP13569 1480 aa27.44■■□□□ 1.98
RTN4IP1-201ENST00000369063 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
RTN4IP1-201ENST00000369063 KIF21AQ7Z4S6 1674 aa27.28■■□□□ 1.96
RTN4IP1-201ENST00000369063 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
RTN4IP1-201ENST00000369063 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
RTN4IP1-201ENST00000369063 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
RTN4IP1-201ENST00000369063 CUX2O14529 1486 aa27.15■■□□□ 1.94
RTN4IP1-201ENST00000369063 PRDM2Q13029 1718 aa27.14■■□□□ 1.93
RTN4IP1-201ENST00000369063 MRC2Q9UBG0 1479 aa27.12■■□□□ 1.93
RTN4IP1-201ENST00000369063 WDR62O43379 1518 aa27.02■■□□□ 1.92
RTN4IP1-201ENST00000369063 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.9
RTN4IP1-201ENST00000369063 ABCC8Q09428 1581 aa26.83■■□□□ 1.89
RTN4IP1-201ENST00000369063 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
RTN4IP1-201ENST00000369063 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
RTN4IP1-201ENST00000369063 CUX1P39880 1505 aa26.65■■□□□ 1.86
RTN4IP1-201ENST00000369063 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
RTN4IP1-201ENST00000369063 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
RTN4IP1-201ENST00000369063 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
RTN4IP1-201ENST00000369063 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
RTN4IP1-201ENST00000369063 SOGA1O94964 1423 aa26.51■■□□□ 1.83
RTN4IP1-201ENST00000369063 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
RTN4IP1-201ENST00000369063 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
RTN4IP1-201ENST00000369063 RAD54L2Q9Y4B4 1467 aa26.48■■□□□ 1.83
RTN4IP1-201ENST00000369063 TOP2BQ02880 1626 aa26.45■■□□□ 1.83
RTN4IP1-201ENST00000369063 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
RTN4IP1-201ENST00000369063 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
RTN4IP1-201ENST00000369063 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.81
RTN4IP1-201ENST00000369063 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
RTN4IP1-201ENST00000369063 EIF4G3O43432 1585 aaKnown RBP26.35■■□□□ 1.81
RTN4IP1-201ENST00000369063 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
RTN4IP1-201ENST00000369063 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
RTN4IP1-201ENST00000369063 DNAJC5Q9H3Z4 198 aa26.24■■□□□ 1.79
RTN4IP1-201ENST00000369063 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
RTN4IP1-201ENST00000369063 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
RTN4IP1-201ENST00000369063 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
RTN4IP1-201ENST00000369063 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
RTN4IP1-201ENST00000369063 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
RTN4IP1-201ENST00000369063 MAGI1Q96QZ7 1491 aaPredicted RBP26.08■■□□□ 1.77
RTN4IP1-201ENST00000369063 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
RTN4IP1-201ENST00000369063 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
RTN4IP1-201ENST00000369063 FBLN2P98095 1184 aa26.04■■□□□ 1.76
RTN4IP1-201ENST00000369063 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
RTN4IP1-201ENST00000369063 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
RTN4IP1-201ENST00000369063 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
RTN4IP1-201ENST00000369063 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
RTN4IP1-201ENST00000369063 CHD1O14646 1710 aa25.97■■□□□ 1.75
RTN4IP1-201ENST00000369063 IGF1RP08069 1367 aa25.9■■□□□ 1.74
RTN4IP1-201ENST00000369063 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
RTN4IP1-201ENST00000369063 ADAMTS12P58397 1594 aa25.89■■□□□ 1.73
RTN4IP1-201ENST00000369063 GRIN2AQ12879 1464 aa25.83■■□□□ 1.72
RTN4IP1-201ENST00000369063 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
RTN4IP1-201ENST00000369063 RUSC2Q8N2Y8 1516 aa25.79■■□□□ 1.72
RTN4IP1-201ENST00000369063 CUL7Q14999 1698 aa25.74■■□□□ 1.71
RTN4IP1-201ENST00000369063 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
RTN4IP1-201ENST00000369063 CARMIL1Q5VZK9 1371 aa25.73■■□□□ 1.71
RTN4IP1-201ENST00000369063 NUP160Q12769 1436 aa25.72■■□□□ 1.71
RTN4IP1-201ENST00000369063 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
RTN4IP1-201ENST00000369063 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
RTN4IP1-201ENST00000369063 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
RTN4IP1-201ENST00000369063 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
RTN4IP1-201ENST00000369063 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
RTN4IP1-201ENST00000369063 RAPGEF2Q9Y4G8 1499 aa25.57■■□□□ 1.68
RTN4IP1-201ENST00000369063 EEA1Q15075 1411 aa25.56■■□□□ 1.68
RTN4IP1-201ENST00000369063 CSRNP3Q8WYN3 585 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms