Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 GUSBP5-201ENST00000418136 578 ntBASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHA13Q9Y5I0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHA13Q9Y5I0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHA13Q9Y5I0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 FEM1AP1-201ENST00000431297 1995 ntBASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 SERBP1P1-201ENST00000396021 1160 ntBASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHA13Q9Y5I0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHA13Q9Y5I0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 AP005435.1-201ENST00000529293 1178 ntBASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 AL138724.1-201ENST00000606771 1088 ntBASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHA13Q9Y5I0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHA13Q9Y5I0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 SLC47A1P1-202ENST00000449666 945 ntBASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 SYT6-210ENST00000641643 1587 ntBASIC22.59■■□□□ 1.21
PCDHA13Q9Y5I0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms