Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.68■■□□□ 1.38
BLOC1S4Q9NUP1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 TERF1P2-201ENST00000583350 1212 ntBASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.67■■□□□ 1.38
BLOC1S4Q9NUP1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 LINC02228-203ENST00000641970 1355 ntBASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.66■■□□□ 1.38
BLOC1S4Q9NUP1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 EEF1DP3-203ENST00000566025 782 ntBASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.65■■□□□ 1.38
BLOC1S4Q9NUP1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.64■■□□□ 1.38
BLOC1S4Q9NUP1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
BLOC1S4Q9NUP1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 CCDC92B-201ENST00000575506 885 ntBASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 AL137060.1-201ENST00000618151 2648 ntBASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
BLOC1S4Q9NUP1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.63■■□□□ 1.37
BLOC1S4Q9NUP1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 FEM1AP4-201ENST00000443167 1987 ntBASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.62■■□□□ 1.37
BLOC1S4Q9NUP1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 AC079140.4-201ENST00000507448 529 ntBASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BLOC1S4Q9NUP1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms