Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 AC105233.4-201ENST00000642045 216 ntBASIC22.03■■□□□ 1.12
RFX6Q8HWS3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 FEM1AP4-201ENST00000443167 1987 ntBASIC22.03■■□□□ 1.12
RFX6Q8HWS3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX6Q8HWS3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 AF106564.1-201ENST00000607058 2553 ntBASIC22.02■■□□□ 1.12
RFX6Q8HWS3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFX6Q8HWS3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.02■■□□□ 1.11
RFX6Q8HWS3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RFX6Q8HWS3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFX6Q8HWS3 RASA4CP-201ENST00000424092 1398 ntBASIC22■■□□□ 1.11
RFX6Q8HWS3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFX6Q8HWS3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 MIR939-201ENST00000401314 82 ntBASIC22■■□□□ 1.11
RFX6Q8HWS3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22■■□□□ 1.11
RFX6Q8HWS3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22■■□□□ 1.11
RFX6Q8HWS3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFX6Q8HWS3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22■■□□□ 1.11
RFX6Q8HWS3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFX6Q8HWS3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 AC091305.1-201ENST00000479476 895 ntBASIC21.98■■□□□ 1.11
RFX6Q8HWS3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.98■■□□□ 1.11
RFX6Q8HWS3 AL031432.3-201ENST00000607698 485 ntBASIC21.98■■□□□ 1.11
RFX6Q8HWS3 AL136967.2-201ENST00000623968 743 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms