Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 AC104564.3-201ENST00000582367 638 ntBASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRGV1A0A0A0MS02 RASA4CP-201ENST00000424092 1398 ntBASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 AC091305.1-201ENST00000479476 895 ntBASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRGV1A0A0A0MS02 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 AC026471.6-201ENST00000622954 1905 ntBASIC15.35■□□□□ 0.05
TRGV1A0A0A0MS02 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 MIR939-201ENST00000401314 82 ntBASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 AC133561.4-201ENST00000566112 224 ntBASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 AC142381.2-201ENST00000566120 298 ntBASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 SMUG1P1-201ENST00000590640 811 ntBASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 AC105233.4-201ENST00000642045 216 ntBASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRGV1A0A0A0MS02 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 AC244015.2-201ENST00000616358 1861 ntBASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 AC007375.3-201ENST00000600936 2314 ntBASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRGV1A0A0A0MS02 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms