RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 NISCHQ9Y2I1 1504 aa51.06■■■■■ 5.77
VDAC1-203ENST00000395047 CCDC180Q9P1Z9 1646 aa45.1■■■■■ 4.81
VDAC1-203ENST00000395047 ABCC9O60706 1549 aa43.78■■■■■ 4.6
VDAC1-203ENST00000395047 DCAF8L2P0C7V8 631 aa42.72■■■■■ 4.43
VDAC1-203ENST00000395047 ZCCHC6Q5VYS8 1495 aaKnown RBP42.64■■■■■ 4.42
VDAC1-203ENST00000395047 NACADO15069 1562 aa42.25■■■■■ 4.35
VDAC1-203ENST00000395047 RB1CC1Q8TDY2 1594 aa42.22■■■■■ 4.35
VDAC1-203ENST00000395047 DCAF1Q9Y4B6 1507 aa42.14■■■■■ 4.34
VDAC1-203ENST00000395047 MYO15BQ96JP2 1530 aa42.07■■■■■ 4.32
VDAC1-203ENST00000395047 UNC13AQ9UPW8 1703 aa41.42■■■■■ 4.22
VDAC1-203ENST00000395047 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
VDAC1-203ENST00000395047 PABPN1Q86U42 306 aaKnown RBP eCLIP41.06■■■■■ 4.16
VDAC1-203ENST00000395047 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
VDAC1-203ENST00000395047 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
VDAC1-203ENST00000395047 EIF4G1Q04637 1599 aaKnown RBP39.83■■■■□ 3.97
VDAC1-203ENST00000395047 CECR2Q9BXF3 1484 aa39.82■■■■□ 3.96
VDAC1-203ENST00000395047 DNAJC5BQ9UF47 199 aa39.66■■■■□ 3.94
VDAC1-203ENST00000395047 CC2D2AQ9P2K1 1620 aa39.57■■■■□ 3.93
VDAC1-203ENST00000395047 SMARCA4P51532 1647 aa39.54■■■■□ 3.92
VDAC1-203ENST00000395047 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
VDAC1-203ENST00000395047 MROH2BQ7Z745 1585 aa39.44■■■■□ 3.9
VDAC1-203ENST00000395047 RSF1Q96T23 1441 aaPredicted RBP39.15■■■■□ 3.86
VDAC1-203ENST00000395047 ATAD2BQ9ULI0 1458 aa39.15■■■■□ 3.86
VDAC1-203ENST00000395047 WIZO95785 1651 aa39.12■■■■□ 3.85
VDAC1-203ENST00000395047 SMARCA2P51531 1590 aa39.1■■■■□ 3.85
VDAC1-203ENST00000395047 PEG3Q9GZU2 1588 aa39.03■■■■□ 3.84
VDAC1-203ENST00000395047 NCAPD3P42695 1498 aa38.97■■■■□ 3.83
VDAC1-203ENST00000395047 BAZ1BQ9UIG0 1483 aaKnown RBP38.9■■■■□ 3.82
VDAC1-203ENST00000395047 HMGXB3Q12766 1538 aa38.84■■■■□ 3.81
VDAC1-203ENST00000395047 SUPT5HO00267 1087 aaKnown RBP38.81■■■■□ 3.8
VDAC1-203ENST00000395047 TOP2AP11388 1531 aaKnown RBP38.6■■■■□ 3.77
VDAC1-203ENST00000395047 CCDC88BA6NC98 1476 aa38.2■■■■□ 3.7
VDAC1-203ENST00000395047 NESP48681 1621 aa38.06■■■■□ 3.68
VDAC1-203ENST00000395047 CADPSQ9ULU8 1353 aa37.92■■■■□ 3.66
VDAC1-203ENST00000395047 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
VDAC1-203ENST00000395047 CFTRP13569 1480 aa37.8■■■■□ 3.64
VDAC1-203ENST00000395047 ERCC6Q03468 1493 aa37.66■■■■□ 3.62
VDAC1-203ENST00000395047 PRDM2Q13029 1718 aa37.65■■■■□ 3.62
VDAC1-203ENST00000395047 KIF21AQ7Z4S6 1674 aa37.63■■■■□ 3.61
VDAC1-203ENST00000395047 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
VDAC1-203ENST00000395047 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
VDAC1-203ENST00000395047 CEP164Q9UPV0 1460 aa37.43■■■■□ 3.58
VDAC1-203ENST00000395047 THOC2Q8NI27 1593 aaKnown RBP37.26■■■■□ 3.56
VDAC1-203ENST00000395047 MRC2Q9UBG0 1479 aa37.23■■■■□ 3.55
VDAC1-203ENST00000395047 URB2Q14146 1524 aaKnown RBP37.14■■■■□ 3.54
VDAC1-203ENST00000395047 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
VDAC1-203ENST00000395047 WDR62O43379 1518 aa37.07■■■■□ 3.52
VDAC1-203ENST00000395047 TOPBP1Q92547 1522 aa37■■■■□ 3.51
VDAC1-203ENST00000395047 DNMBPQ6XZF7 1577 aa36.98■■■■□ 3.51
VDAC1-203ENST00000395047 CUX1P39880 1505 aa36.95■■■■□ 3.51
VDAC1-203ENST00000395047 WRNQ14191 1432 aaPredicted RBP eCLIP36.91■■■■□ 3.5
VDAC1-203ENST00000395047 CUX2O14529 1486 aa36.9■■■■□ 3.5
VDAC1-203ENST00000395047 SYNJ1O43426 1573 aa36.85■■■■□ 3.49
VDAC1-203ENST00000395047 TOP2BQ02880 1626 aa36.76■■■■□ 3.47
VDAC1-203ENST00000395047 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
VDAC1-203ENST00000395047 BIVM-ERCC5R4GMW8 1640 aa36.74■■■■□ 3.47
VDAC1-203ENST00000395047 POLA1P09884 1462 aaPredicted RBP36.73■■■■□ 3.47
VDAC1-203ENST00000395047 RAD54L2Q9Y4B4 1467 aa36.64■■■■□ 3.46
VDAC1-203ENST00000395047 SOGA1O94964 1423 aa36.6■■■■□ 3.45
VDAC1-203ENST00000395047 IFT140Q96RY7 1462 aa36.57■■■■□ 3.44
VDAC1-203ENST00000395047 TARBP1Q13395 1621 aaKnown RBP36.54■■■■□ 3.44
VDAC1-203ENST00000395047 TRIM41Q8WV44 630 aa36.53■■■■□ 3.44
VDAC1-203ENST00000395047 ZNF608Q9ULD9 1512 aaPredicted RBP36.47■■■■□ 3.43
VDAC1-203ENST00000395047 CHIC1Q5VXU3 224 aa36.43■■■■□ 3.42
VDAC1-203ENST00000395047 WDR97A6NE52 1622 aa36.39■■■■□ 3.42
VDAC1-203ENST00000395047 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
VDAC1-203ENST00000395047 AQRO60306 1485 aaKnown RBP eCLIP36.35■■■■□ 3.412e-15■■■■■ 60.6
VDAC1-203ENST00000395047 ABCA10Q8WWZ4 1543 aa36.34■■■■□ 3.41
VDAC1-203ENST00000395047 EIF4G3O43432 1585 aaKnown RBP36.33■■■■□ 3.41
VDAC1-203ENST00000395047 ABCA5Q8WWZ7 1642 aa36.18■■■■□ 3.38
VDAC1-203ENST00000395047 GAPVD1Q14C86 1478 aa36.17■■■■□ 3.38
VDAC1-203ENST00000395047 PBRM1Q86U86 1689 aa36.13■■■■□ 3.37
VDAC1-203ENST00000395047 KIF27Q86VH2 1401 aa36.07■■■■□ 3.37
VDAC1-203ENST00000395047 RUSC2Q8N2Y8 1516 aa36.06■■■■□ 3.36
VDAC1-203ENST00000395047 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
VDAC1-203ENST00000395047 SNAPC4Q5SXM2 1469 aa36■■■■□ 3.35
VDAC1-203ENST00000395047 FAM9AQ8IZU1 332 aaPredicted RBP35.91■■■■□ 3.34
VDAC1-203ENST00000395047 ERICH3Q5RHP9 1530 aa35.91■■■■□ 3.34
VDAC1-203ENST00000395047 FBLN2P98095 1184 aa35.9■■■■□ 3.34
VDAC1-203ENST00000395047 MAGI1Q96QZ7 1491 aaPredicted RBP35.87■■■■□ 3.33
VDAC1-203ENST00000395047 IGF1RP08069 1367 aa35.86■■■■□ 3.33
VDAC1-203ENST00000395047 CHD1O14646 1710 aa35.83■■■■□ 3.33
VDAC1-203ENST00000395047 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
VDAC1-203ENST00000395047 CHMP7Q8WUX9 453 aaPredicted RBP35.79■■■■□ 3.32
VDAC1-203ENST00000395047 SYNJ2O15056 1496 aa35.75■■■■□ 3.31
VDAC1-203ENST00000395047 FHAD1B1AJZ9 1412 aa35.73■■■■□ 3.31
VDAC1-203ENST00000395047 CUL7Q14999 1698 aa35.73■■■■□ 3.31
VDAC1-203ENST00000395047 EEA1Q15075 1411 aa35.68■■■■□ 3.3
VDAC1-203ENST00000395047 CARMIL1Q5VZK9 1371 aa35.68■■■■□ 3.3
VDAC1-203ENST00000395047 CSRNP3Q8WYN3 585 aa35.68■■■■□ 3.3
VDAC1-203ENST00000395047 GRIN2AQ12879 1464 aa35.61■■■■□ 3.29
VDAC1-203ENST00000395047 OSCARQ8IYS5 282 aa35.58■■■■□ 3.29
VDAC1-203ENST00000395047 EHMT2Q96KQ7 1210 aa35.54■■■■□ 3.28
VDAC1-203ENST00000395047 RAPGEF2Q9Y4G8 1499 aa35.52■■■■□ 3.28
VDAC1-203ENST00000395047 PRXQ9BXM0 1461 aa35.5■■■■□ 3.27
VDAC1-203ENST00000395047 CEP170Q5SW79 1584 aa35.46■■■■□ 3.27
VDAC1-203ENST00000395047 NUP160Q12769 1436 aa35.37■■■■□ 3.25
VDAC1-203ENST00000395047 KIF21BO75037 1637 aa35.35■■■■□ 3.25
VDAC1-203ENST00000395047 CLASP1Q7Z460 1538 aa35.31■■■■□ 3.24
VDAC1-203ENST00000395047 CTTNBP2Q8WZ74 1663 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms