Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 AC098818.2-201ENST00000564925 2320 ntBASIC14.94□□□□□ -0.02
VPS25Q9BRG1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS25Q9BRG1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS25Q9BRG1 LINC01006-201ENST00000333319 2292 ntBASIC14.92□□□□□ -0.02
VPS25Q9BRG1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 AC104581.1-202ENST00000635932 2618 ntBASIC14.92□□□□□ -0.02
VPS25Q9BRG1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 AL356309.3-201ENST00000624132 1934 ntBASIC14.92□□□□□ -0.02
VPS25Q9BRG1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPS25Q9BRG1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 AL133373.2-201ENST00000623187 2828 ntBASIC14.91□□□□□ -0.02
VPS25Q9BRG1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.91□□□□□ -0.02
VPS25Q9BRG1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 AL032819.2-201ENST00000624543 2162 ntBASIC14.9□□□□□ -0.02
VPS25Q9BRG1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPS25Q9BRG1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.89□□□□□ -0.03
VPS25Q9BRG1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms