RNA–Protein interactions for RNA: ENST00000402229.5

PACSIN2-203, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PACSIN2, Length 1,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-203ENST00000402229 NISCHQ9Y2I1 1504 aa37.03■■■■□ 3.52
PACSIN2-203ENST00000402229 CCDC180Q9P1Z9 1646 aa32.49■■■□□ 2.79
PACSIN2-203ENST00000402229 ABCC9O60706 1549 aa31.19■■■□□ 2.58
PACSIN2-203ENST00000402229 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.55
PACSIN2-203ENST00000402229 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.54
PACSIN2-203ENST00000402229 HRCP23327 699 aa30.81■■■□□ 2.52
PACSIN2-203ENST00000402229 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
PACSIN2-203ENST00000402229 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.51
PACSIN2-203ENST00000402229 DCAF1Q9Y4B6 1507 aa30.58■■■□□ 2.49
PACSIN2-203ENST00000402229 MYO15BQ96JP2 1530 aa30.49■■■□□ 2.47
PACSIN2-203ENST00000402229 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
PACSIN2-203ENST00000402229 NACADO15069 1562 aa30.37■■■□□ 2.45
PACSIN2-203ENST00000402229 RB1CC1Q8TDY2 1594 aa30.23■■■□□ 2.43
PACSIN2-203ENST00000402229 PCGF6Q9BYE7 350 aa30.04■■■□□ 2.4
PACSIN2-203ENST00000402229 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
PACSIN2-203ENST00000402229 PPARGC1BQ86YN6 1023 aaKnown RBP29.69■■■□□ 2.34
PACSIN2-203ENST00000402229 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
PACSIN2-203ENST00000402229 TRIM26Q12899 539 aaPredicted RBP29.57■■■□□ 2.32
PACSIN2-203ENST00000402229 PELP1Q8IZL8 1130 aaKnown RBP29.48■■■□□ 2.31
PACSIN2-203ENST00000402229 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
PACSIN2-203ENST00000402229 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
PACSIN2-203ENST00000402229 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
PACSIN2-203ENST00000402229 LOC105371045A0A1W2PR82 267 aa29.31■■■□□ 2.28
PACSIN2-203ENST00000402229 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
PACSIN2-203ENST00000402229 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
PACSIN2-203ENST00000402229 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
PACSIN2-203ENST00000402229 SCAF1Q9H7N4 1312 aaKnown RBP28.71■■■□□ 2.19
PACSIN2-203ENST00000402229 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
PACSIN2-203ENST00000402229 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
PACSIN2-203ENST00000402229 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
PACSIN2-203ENST00000402229 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
PACSIN2-203ENST00000402229 MYT1Q01538 1121 aa28.37■■■□□ 2.13
PACSIN2-203ENST00000402229 WIZO95785 1651 aa28.35■■■□□ 2.13
PACSIN2-203ENST00000402229 ACIN1Q9UKV3 1341 aaKnown RBP28.32■■■□□ 2.12
PACSIN2-203ENST00000402229 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
PACSIN2-203ENST00000402229 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
PACSIN2-203ENST00000402229 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
PACSIN2-203ENST00000402229 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
PACSIN2-203ENST00000402229 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
PACSIN2-203ENST00000402229 CENPBP07199 599 aaPredicted RBP28.14■■■□□ 2.1
PACSIN2-203ENST00000402229 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
PACSIN2-203ENST00000402229 CCER1Q8TC90 406 aaPredicted RBP28.07■■■□□ 2.08
PACSIN2-203ENST00000402229 NEUROD1Q13562 356 aa28.06■■■□□ 2.08
PACSIN2-203ENST00000402229 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
PACSIN2-203ENST00000402229 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
PACSIN2-203ENST00000402229 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
PACSIN2-203ENST00000402229 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
PACSIN2-203ENST00000402229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.97■■■□□ 2.07
PACSIN2-203ENST00000402229 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
PACSIN2-203ENST00000402229 HMGXB3Q12766 1538 aa27.95■■■□□ 2.07
PACSIN2-203ENST00000402229 GTF3C3Q9Y5Q9 886 aa27.87■■■□□ 2.05
PACSIN2-203ENST00000402229 EHMT2Q96KQ7 1210 aa27.78■■■□□ 2.04
PACSIN2-203ENST00000402229 EEA1Q15075 1411 aa27.76■■■□□ 2.03
PACSIN2-203ENST00000402229 TNIKQ9UKE5 1360 aa27.75■■■□□ 2.03
PACSIN2-203ENST00000402229 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
PACSIN2-203ENST00000402229 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
PACSIN2-203ENST00000402229 ZNF316A6NFI3 1004 aaPredicted RBP27.67■■■□□ 2.02
PACSIN2-203ENST00000402229 ABCC8Q09428 1581 aa27.56■■■□□ 2
PACSIN2-203ENST00000402229 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
PACSIN2-203ENST00000402229 SOGA1O94964 1423 aa27.4■■□□□ 1.98
PACSIN2-203ENST00000402229 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
PACSIN2-203ENST00000402229 KIF21BO75037 1637 aa27.35■■□□□ 1.97
PACSIN2-203ENST00000402229 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.96
PACSIN2-203ENST00000402229 CFTRP13569 1480 aa27.29■■□□□ 1.96
PACSIN2-203ENST00000402229 CADPSQ9ULU8 1353 aa27.29■■□□□ 1.96
PACSIN2-203ENST00000402229 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
PACSIN2-203ENST00000402229 NESP48681 1621 aa27.25■■□□□ 1.95
PACSIN2-203ENST00000402229 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.94
PACSIN2-203ENST00000402229 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
PACSIN2-203ENST00000402229 MIER1Q8N108 512 aa27.19■■□□□ 1.94
PACSIN2-203ENST00000402229 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
PACSIN2-203ENST00000402229 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
PACSIN2-203ENST00000402229 VPS8Q8N3P4 1428 aa27.14■■□□□ 1.94
PACSIN2-203ENST00000402229 PRDM2Q13029 1718 aa27.14■■□□□ 1.93
PACSIN2-203ENST00000402229 YTHDC1Q96MU7 727 aaKnown RBP27.13■■□□□ 1.93
PACSIN2-203ENST00000402229 CLIP1P30622 1438 aa27.08■■□□□ 1.93
PACSIN2-203ENST00000402229 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
PACSIN2-203ENST00000402229 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
PACSIN2-203ENST00000402229 PDS5BQ9NTI5 1447 aa26.95■■□□□ 1.91
PACSIN2-203ENST00000402229 HNRNPUL2Q1KMD3 747 aaKnown RBP26.95■■□□□ 1.9
PACSIN2-203ENST00000402229 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
PACSIN2-203ENST00000402229 APLP2Q06481 763 aa26.88■■□□□ 1.89
PACSIN2-203ENST00000402229 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
PACSIN2-203ENST00000402229 CUX1P39880 1505 aa26.78■■□□□ 1.88
PACSIN2-203ENST00000402229 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
PACSIN2-203ENST00000402229 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
PACSIN2-203ENST00000402229 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
PACSIN2-203ENST00000402229 SUPT16HQ9Y5B9 1047 aaKnown RBP26.76■■□□□ 1.87
PACSIN2-203ENST00000402229 CUX2O14529 1486 aa26.74■■□□□ 1.87
PACSIN2-203ENST00000402229 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
PACSIN2-203ENST00000402229 URB2Q14146 1524 aaKnown RBP26.7■■□□□ 1.87
PACSIN2-203ENST00000402229 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
PACSIN2-203ENST00000402229 RRBP1Q9P2E9 1410 aaKnown RBP26.67■■□□□ 1.86
PACSIN2-203ENST00000402229 DNMBPQ6XZF7 1577 aa26.66■■□□□ 1.86
PACSIN2-203ENST00000402229 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
PACSIN2-203ENST00000402229 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
PACSIN2-203ENST00000402229 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
PACSIN2-203ENST00000402229 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
PACSIN2-203ENST00000402229 PRXQ9BXM0 1461 aa26.57■■□□□ 1.84
PACSIN2-203ENST00000402229 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms