RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
CDC42BPG-201ENST00000342711 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
CDC42BPG-201ENST00000342711 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
CDC42BPG-201ENST00000342711 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
CDC42BPG-201ENST00000342711 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
CDC42BPG-201ENST00000342711 SHROOM4Q9ULL8 1493 aa26.32■■□□□ 1.8
CDC42BPG-201ENST00000342711 APLP2Q06481 763 aa25.8■■□□□ 1.72
CDC42BPG-201ENST00000342711 PCGF6Q9BYE7 350 aa25.57■■□□□ 1.68
CDC42BPG-201ENST00000342711 TTBK1Q5TCY1 1321 aaPredicted RBP25.56■■□□□ 1.68
CDC42BPG-201ENST00000342711 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
CDC42BPG-201ENST00000342711 ERICH6Q7L0X2 663 aa25.39■■□□□ 1.65
CDC42BPG-201ENST00000342711 CENPBP07199 599 aaPredicted RBP25.34■■□□□ 1.65
CDC42BPG-201ENST00000342711 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
CDC42BPG-201ENST00000342711 ZEB1P37275 1124 aaPredicted RBP25.14■■□□□ 1.61
CDC42BPG-201ENST00000342711 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
CDC42BPG-201ENST00000342711 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
CDC42BPG-201ENST00000342711 YTHDC1Q96MU7 727 aaKnown RBP24.87■■□□□ 1.57
CDC42BPG-201ENST00000342711 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
CDC42BPG-201ENST00000342711 NEFLP07196 543 aa24.81■■□□□ 1.56
CDC42BPG-201ENST00000342711 MYT1Q01538 1121 aa24.7■■□□□ 1.54
CDC42BPG-201ENST00000342711 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
CDC42BPG-201ENST00000342711 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
CDC42BPG-201ENST00000342711 TRIM26Q12899 539 aaPredicted RBP24.3■■□□□ 1.48
CDC42BPG-201ENST00000342711 HRCP23327 699 aa24.19■■□□□ 1.46
CDC42BPG-201ENST00000342711 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
CDC42BPG-201ENST00000342711 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
CDC42BPG-201ENST00000342711 ITGAEP38570 1179 aa24.08■■□□□ 1.45
CDC42BPG-201ENST00000342711 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
CDC42BPG-201ENST00000342711 HNRNPUL2Q1KMD3 747 aaKnown RBP23.91■■□□□ 1.42
CDC42BPG-201ENST00000342711 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
CDC42BPG-201ENST00000342711 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
CDC42BPG-201ENST00000342711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
CDC42BPG-201ENST00000342711 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
CDC42BPG-201ENST00000342711 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
CDC42BPG-201ENST00000342711 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
CDC42BPG-201ENST00000342711 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
CDC42BPG-201ENST00000342711 CLSPNQ9HAW4 1339 aa23.58■■□□□ 1.36
CDC42BPG-201ENST00000342711 SLC4A1APQ9BWU0 796 aaKnown RBP23.57■■□□□ 1.36
CDC42BPG-201ENST00000342711 BCANQ96GW7 911 aa23.41■■□□□ 1.34
CDC42BPG-201ENST00000342711 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
CDC42BPG-201ENST00000342711 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
CDC42BPG-201ENST00000342711 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
CDC42BPG-201ENST00000342711 TRIM52Q96A61 297 aa23.28■■□□□ 1.32
CDC42BPG-201ENST00000342711 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
CDC42BPG-201ENST00000342711 ANP32CO43423 234 aa23.17■■□□□ 1.3
CDC42BPG-201ENST00000342711 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
CDC42BPG-201ENST00000342711 ABCC9O60706 1549 aa23.01■■□□□ 1.27
CDC42BPG-201ENST00000342711 ZBTB47Q9UFB7 747 aaPredicted RBP23.01■■□□□ 1.27
CDC42BPG-201ENST00000342711 BCL11AQ9H165 835 aa22.93■■□□□ 1.26
CDC42BPG-201ENST00000342711 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
CDC42BPG-201ENST00000342711 ACIN1Q9UKV3 1341 aaKnown RBP22.9■■□□□ 1.26
CDC42BPG-201ENST00000342711 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
CDC42BPG-201ENST00000342711 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
CDC42BPG-201ENST00000342711 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
CDC42BPG-201ENST00000342711 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDC42BPG-201ENST00000342711 NEFMP07197 916 aa22.67■■□□□ 1.22
CDC42BPG-201ENST00000342711 FKBP8Q14318 412 aa22.63■■□□□ 1.21
CDC42BPG-201ENST00000342711 FBLN2P98095 1184 aa22.62■■□□□ 1.21
CDC42BPG-201ENST00000342711 P3H3Q8IVL6 736 aa22.62■■□□□ 1.21
CDC42BPG-201ENST00000342711 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
CDC42BPG-201ENST00000342711 EIF5BO60841 1220 aaKnown RBP22.6■■□□□ 1.21
CDC42BPG-201ENST00000342711 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
CDC42BPG-201ENST00000342711 ANP32BQ92688 251 aaKnown RBP22.5■■□□□ 1.19
CDC42BPG-201ENST00000342711 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
CDC42BPG-201ENST00000342711 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
CDC42BPG-201ENST00000342711 HSP90AA1P07900 732 aaKnown RBP22.46■■□□□ 1.19
CDC42BPG-201ENST00000342711 HNRNPUQ00839 825 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDC42BPG-201ENST00000342711 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
CDC42BPG-201ENST00000342711 FAM9BQ8IZU0 186 aa22.42■■□□□ 1.18
CDC42BPG-201ENST00000342711 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
CDC42BPG-201ENST00000342711 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
CDC42BPG-201ENST00000342711 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
CDC42BPG-201ENST00000342711 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
CDC42BPG-201ENST00000342711 NBR1Q14596 966 aa22.34■■□□□ 1.17
CDC42BPG-201ENST00000342711 CCDC136Q96JN2 1154 aa22.28■■□□□ 1.16
CDC42BPG-201ENST00000342711 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
CDC42BPG-201ENST00000342711 ARXQ96QS3 562 aa22.23■■□□□ 1.15
CDC42BPG-201ENST00000342711 GLIPR1L2Q4G1C9 344 aa22.23■■□□□ 1.15
CDC42BPG-201ENST00000342711 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
CDC42BPG-201ENST00000342711 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
CDC42BPG-201ENST00000342711 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.15■■□□□ 1.14
CDC42BPG-201ENST00000342711 IRX6P78412 446 aaPredicted RBP22.13■■□□□ 1.13
CDC42BPG-201ENST00000342711 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
CDC42BPG-201ENST00000342711 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CDC42BPG-201ENST00000342711 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
CDC42BPG-201ENST00000342711 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
CDC42BPG-201ENST00000342711 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
CDC42BPG-201ENST00000342711 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
CDC42BPG-201ENST00000342711 WDR43Q15061 677 aaKnown RBP eCLIP22.09■■□□□ 1.13
CDC42BPG-201ENST00000342711 MIER1Q8N108 512 aa22.07■■□□□ 1.12
CDC42BPG-201ENST00000342711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
CDC42BPG-201ENST00000342711 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
CDC42BPG-201ENST00000342711 KDM2AQ9Y2K7 1162 aa22■■□□□ 1.11
CDC42BPG-201ENST00000342711 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
CDC42BPG-201ENST00000342711 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
CDC42BPG-201ENST00000342711 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.09
CDC42BPG-201ENST00000342711 DDRGK1Q96HY6 314 aa21.86■■□□□ 1.09
CDC42BPG-201ENST00000342711 BECN1Q14457 450 aa21.84■■□□□ 1.09
CDC42BPG-201ENST00000342711 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.08
CDC42BPG-201ENST00000342711 NACADO15069 1562 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms