RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
COL4A2-201ENST00000360467 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
COL4A2-201ENST00000360467 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
COL4A2-201ENST00000360467 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
COL4A2-201ENST00000360467 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.99
COL4A2-201ENST00000360467 TTBK1Q5TCY1 1321 aaPredicted RBP27.25■■□□□ 1.95
COL4A2-201ENST00000360467 APLP2Q06481 763 aa27.09■■□□□ 1.93
COL4A2-201ENST00000360467 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
COL4A2-201ENST00000360467 RANGAP1P46060 587 aaPredicted RBP27.01■■□□□ 1.91
COL4A2-201ENST00000360467 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
COL4A2-201ENST00000360467 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.86
COL4A2-201ENST00000360467 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
COL4A2-201ENST00000360467 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
COL4A2-201ENST00000360467 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
COL4A2-201ENST00000360467 CCER1Q8TC90 406 aaPredicted RBP26.02■■□□□ 1.76
COL4A2-201ENST00000360467 ERICH6Q7L0X2 663 aa25.95■■□□□ 1.75
COL4A2-201ENST00000360467 PPARGC1BQ86YN6 1023 aaKnown RBP25.94■■□□□ 1.74
COL4A2-201ENST00000360467 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.73
COL4A2-201ENST00000360467 YTHDC1Q96MU7 727 aaKnown RBP25.77■■□□□ 1.72
COL4A2-201ENST00000360467 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
COL4A2-201ENST00000360467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
COL4A2-201ENST00000360467 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
COL4A2-201ENST00000360467 CENPBP07199 599 aaPredicted RBP25.62■■□□□ 1.69
COL4A2-201ENST00000360467 ITGAEP38570 1179 aa25.57■■□□□ 1.68
COL4A2-201ENST00000360467 POLR3GLQ9BT43 218 aa25.57■■□□□ 1.68
COL4A2-201ENST00000360467 CNGB1Q14028 1251 aaPredicted RBP25.49■■□□□ 1.67
COL4A2-201ENST00000360467 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
COL4A2-201ENST00000360467 NEFLP07196 543 aa25.41■■□□□ 1.66
COL4A2-201ENST00000360467 SLC4A1APQ9BWU0 796 aaKnown RBP25.23■■□□□ 1.63
COL4A2-201ENST00000360467 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
COL4A2-201ENST00000360467 MYT1Q01538 1121 aa24.9■■□□□ 1.58
COL4A2-201ENST00000360467 DAXXQ9UER7 740 aaPredicted RBP24.89■■□□□ 1.57
COL4A2-201ENST00000360467 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
COL4A2-201ENST00000360467 TRIM26Q12899 539 aaPredicted RBP24.84■■□□□ 1.57
COL4A2-201ENST00000360467 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
COL4A2-201ENST00000360467 FBLN2P98095 1184 aa24.67■■□□□ 1.54
COL4A2-201ENST00000360467 TRIM52Q96A61 297 aa24.65■■□□□ 1.54
COL4A2-201ENST00000360467 ABCC9O60706 1549 aa24.62■■□□□ 1.53
COL4A2-201ENST00000360467 HRCP23327 699 aa24.57■■□□□ 1.52
COL4A2-201ENST00000360467 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
COL4A2-201ENST00000360467 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
COL4A2-201ENST00000360467 ZNF326Q5BKZ1 582 aaKnown RBP24.52■■□□□ 1.52
COL4A2-201ENST00000360467 ARID3CA6NKF2 412 aa24.48■■□□□ 1.51
COL4A2-201ENST00000360467 SLC24A1O60721 1099 aa24.47■■□□□ 1.51
COL4A2-201ENST00000360467 BCL11AQ9H165 835 aa24.46■■□□□ 1.51
COL4A2-201ENST00000360467 BCANQ96GW7 911 aa24.42■■□□□ 1.5
COL4A2-201ENST00000360467 ZNF316A6NFI3 1004 aaPredicted RBP24.35■■□□□ 1.49
COL4A2-201ENST00000360467 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
COL4A2-201ENST00000360467 P3H3Q8IVL6 736 aa24.26■■□□□ 1.47
COL4A2-201ENST00000360467 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
COL4A2-201ENST00000360467 ZNF777Q9ULD5 760 aaPredicted RBP24.1■■□□□ 1.45
COL4A2-201ENST00000360467 ZBTB47Q9UFB7 747 aaPredicted RBP24.03■■□□□ 1.44
COL4A2-201ENST00000360467 RTL5Q5HYW3 569 aaPredicted RBP24.02■■□□□ 1.44
COL4A2-201ENST00000360467 CANXP27824 592 aaKnown RBP23.99■■□□□ 1.43
COL4A2-201ENST00000360467 ANP32CO43423 234 aa23.92■■□□□ 1.42
COL4A2-201ENST00000360467 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
COL4A2-201ENST00000360467 ESF1Q9H501 851 aaKnown RBP23.86■■□□□ 1.41
COL4A2-201ENST00000360467 NEFMP07197 916 aa23.82■■□□□ 1.4
COL4A2-201ENST00000360467 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
COL4A2-201ENST00000360467 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
COL4A2-201ENST00000360467 PLEKHG5O94827 1062 aa23.64■■□□□ 1.38
COL4A2-201ENST00000360467 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
COL4A2-201ENST00000360467 CDK11AQ9UQ88 783 aaPredicted RBP23.63■■□□□ 1.37
COL4A2-201ENST00000360467 GTF3C3Q9Y5Q9 886 aa23.61■■□□□ 1.37
COL4A2-201ENST00000360467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.37
COL4A2-201ENST00000360467 NPM2Q86SE8 214 aaKnown RBP23.58■■□□□ 1.36
COL4A2-201ENST00000360467 NPM1P06748 294 aaKnown RBP eCLIP23.56■■□□□ 1.36
COL4A2-201ENST00000360467 A0A0G2JS52 829 aa23.55■■□□□ 1.36
COL4A2-201ENST00000360467 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
COL4A2-201ENST00000360467 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
COL4A2-201ENST00000360467 CHIC2Q9UKJ5 165 aa23.49■■□□□ 1.35
COL4A2-201ENST00000360467 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
COL4A2-201ENST00000360467 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
COL4A2-201ENST00000360467 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
COL4A2-201ENST00000360467 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
COL4A2-201ENST00000360467 TONSLQ96HA7 1378 aa23.3■■□□□ 1.32
COL4A2-201ENST00000360467 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
COL4A2-201ENST00000360467 HSP90AA1P07900 732 aaKnown RBP23.25■■□□□ 1.31
COL4A2-201ENST00000360467 ANP32AP39687 249 aaKnown RBP23.24■■□□□ 1.31
COL4A2-201ENST00000360467 DDX10Q13206 875 aaKnown RBP23.21■■□□□ 1.31
COL4A2-201ENST00000360467 KCNH8Q96L42 1107 aa23.21■■□□□ 1.31
COL4A2-201ENST00000360467 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
COL4A2-201ENST00000360467 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.3
COL4A2-201ENST00000360467 FKBP8Q14318 412 aa23.18■■□□□ 1.3
COL4A2-201ENST00000360467 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.3
COL4A2-201ENST00000360467 ARXQ96QS3 562 aa23.09■■□□□ 1.29
COL4A2-201ENST00000360467 ARID4BQ4LE39 1312 aaPredicted RBP23.09■■□□□ 1.29
COL4A2-201ENST00000360467 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.28
COL4A2-201ENST00000360467 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.28
COL4A2-201ENST00000360467 SENP3-EIF4A1A0A087X0R7 540 aa23.07■■□□□ 1.28
COL4A2-201ENST00000360467 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
COL4A2-201ENST00000360467 TSPY4P0CV99 314 aa23.06■■□□□ 1.28
COL4A2-201ENST00000360467 TSPY10P0CW01 314 aa23.06■■□□□ 1.28
COL4A2-201ENST00000360467 RRP7BPQ9NSQ0 103 aa23.02■■□□□ 1.27
COL4A2-201ENST00000360467 HAP1P54257 671 aaPredicted RBP23.01■■□□□ 1.27
COL4A2-201ENST00000360467 UPF2Q9HAU5 1272 aaKnown RBP23■■□□□ 1.27
COL4A2-201ENST00000360467 IRX6P78412 446 aaPredicted RBP22.99■■□□□ 1.27
COL4A2-201ENST00000360467 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
COL4A2-201ENST00000360467 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
COL4A2-201ENST00000360467 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms