RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
SNAPC4-201ENST00000298532 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
SNAPC4-201ENST00000298532 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
SNAPC4-201ENST00000298532 PELP1Q8IZL8 1130 aaKnown RBP26.24■■□□□ 1.79
SNAPC4-201ENST00000298532 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
SNAPC4-201ENST00000298532 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
SNAPC4-201ENST00000298532 EHMT2Q96KQ7 1210 aa25.71■■□□□ 1.71
SNAPC4-201ENST00000298532 CENPBP07199 599 aaPredicted RBP25.5■■□□□ 1.67
SNAPC4-201ENST00000298532 ZEB1P37275 1124 aaPredicted RBP25.48■■□□□ 1.67
SNAPC4-201ENST00000298532 MYT1Q01538 1121 aa25.41■■□□□ 1.66
SNAPC4-201ENST00000298532 APLP2Q06481 763 aa25.37■■□□□ 1.65
SNAPC4-201ENST00000298532 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
SNAPC4-201ENST00000298532 ERICH6Q7L0X2 663 aa25.08■■□□□ 1.6
SNAPC4-201ENST00000298532 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
SNAPC4-201ENST00000298532 TTBK1Q5TCY1 1321 aaPredicted RBP25■■□□□ 1.59
SNAPC4-201ENST00000298532 HRCP23327 699 aa24.87■■□□□ 1.57
SNAPC4-201ENST00000298532 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
SNAPC4-201ENST00000298532 ABCC9O60706 1549 aa24.8■■□□□ 1.56
SNAPC4-201ENST00000298532 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
SNAPC4-201ENST00000298532 NEFLP07196 543 aa24.66■■□□□ 1.54
SNAPC4-201ENST00000298532 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
SNAPC4-201ENST00000298532 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
SNAPC4-201ENST00000298532 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.49
SNAPC4-201ENST00000298532 PPARGC1BQ86YN6 1023 aaKnown RBP24.25■■□□□ 1.47
SNAPC4-201ENST00000298532 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNAPC4-201ENST00000298532 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
SNAPC4-201ENST00000298532 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
SNAPC4-201ENST00000298532 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
SNAPC4-201ENST00000298532 CCDC180Q9P1Z9 1646 aa24.05■■□□□ 1.44
SNAPC4-201ENST00000298532 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
SNAPC4-201ENST00000298532 DAXXQ9UER7 740 aaPredicted RBP23.82■■□□□ 1.4
SNAPC4-201ENST00000298532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.76■■□□□ 1.39
SNAPC4-201ENST00000298532 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
SNAPC4-201ENST00000298532 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
SNAPC4-201ENST00000298532 ITGAEP38570 1179 aa23.65■■□□□ 1.38
SNAPC4-201ENST00000298532 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
SNAPC4-201ENST00000298532 RTL5Q5HYW3 569 aaPredicted RBP23.61■■□□□ 1.37
SNAPC4-201ENST00000298532 ZCCHC6Q5VYS8 1495 aaKnown RBP23.58■■□□□ 1.37
SNAPC4-201ENST00000298532 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
SNAPC4-201ENST00000298532 POLR3GLQ9BT43 218 aa23.46■■□□□ 1.35
SNAPC4-201ENST00000298532 ACIN1Q9UKV3 1341 aaKnown RBP23.46■■□□□ 1.35
SNAPC4-201ENST00000298532 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
SNAPC4-201ENST00000298532 NACADO15069 1562 aa23.4■■□□□ 1.34
SNAPC4-201ENST00000298532 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
SNAPC4-201ENST00000298532 BCANQ96GW7 911 aa23.31■■□□□ 1.32
SNAPC4-201ENST00000298532 CNGB1Q14028 1251 aaPredicted RBP23.26■■□□□ 1.31
SNAPC4-201ENST00000298532 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
SNAPC4-201ENST00000298532 FBLN2P98095 1184 aa23.19■■□□□ 1.3
SNAPC4-201ENST00000298532 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
SNAPC4-201ENST00000298532 ANP32CO43423 234 aa23.13■■□□□ 1.29
SNAPC4-201ENST00000298532 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
SNAPC4-201ENST00000298532 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
SNAPC4-201ENST00000298532 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
SNAPC4-201ENST00000298532 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
SNAPC4-201ENST00000298532 ANP32AP39687 249 aaKnown RBP22.84■■□□□ 1.25
SNAPC4-201ENST00000298532 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
SNAPC4-201ENST00000298532 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
SNAPC4-201ENST00000298532 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
SNAPC4-201ENST00000298532 FKBP8Q14318 412 aa22.75■■□□□ 1.23
SNAPC4-201ENST00000298532 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
SNAPC4-201ENST00000298532 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
SNAPC4-201ENST00000298532 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
SNAPC4-201ENST00000298532 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
SNAPC4-201ENST00000298532 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
SNAPC4-201ENST00000298532 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
SNAPC4-201ENST00000298532 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
SNAPC4-201ENST00000298532 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
SNAPC4-201ENST00000298532 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
SNAPC4-201ENST00000298532 ZBTB47Q9UFB7 747 aaPredicted RBP22.49■■□□□ 1.19
SNAPC4-201ENST00000298532 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
SNAPC4-201ENST00000298532 HNRNPUQ00839 825 aaKnown RBP eCLIP22.48■■□□□ 1.19
SNAPC4-201ENST00000298532 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
SNAPC4-201ENST00000298532 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
SNAPC4-201ENST00000298532 ESF1Q9H501 851 aaKnown RBP22.44■■□□□ 1.18
SNAPC4-201ENST00000298532 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
SNAPC4-201ENST00000298532 MIER1Q8N108 512 aa22.43■■□□□ 1.18
SNAPC4-201ENST00000298532 GLIPR1L2Q4G1C9 344 aa22.38■■□□□ 1.17
SNAPC4-201ENST00000298532 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
SNAPC4-201ENST00000298532 NBR1Q14596 966 aa22.34■■□□□ 1.17
SNAPC4-201ENST00000298532 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
SNAPC4-201ENST00000298532 ARID3CA6NKF2 412 aa22.3■■□□□ 1.16
SNAPC4-201ENST00000298532 ANP32BQ92688 251 aaKnown RBP22.3■■□□□ 1.16
SNAPC4-201ENST00000298532 CCDC136Q96JN2 1154 aa22.3■■□□□ 1.16
SNAPC4-201ENST00000298532 ANP32EQ9BTT0 268 aa22.3■■□□□ 1.16
SNAPC4-201ENST00000298532 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
SNAPC4-201ENST00000298532 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
SNAPC4-201ENST00000298532 EEA1Q15075 1411 aa22.28■■□□□ 1.16
SNAPC4-201ENST00000298532 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
SNAPC4-201ENST00000298532 UPF2Q9HAU5 1272 aaKnown RBP22.22■■□□□ 1.15
SNAPC4-201ENST00000298532 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
SNAPC4-201ENST00000298532 KIF27Q86VH2 1401 aa22.18■■□□□ 1.14
SNAPC4-201ENST00000298532 NEFMP07197 916 aa22.17■■□□□ 1.14
SNAPC4-201ENST00000298532 BCL11AQ9H165 835 aa22.15■■□□□ 1.14
SNAPC4-201ENST00000298532 HSP90AA1P07900 732 aaKnown RBP22.13■■□□□ 1.13
SNAPC4-201ENST00000298532 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
SNAPC4-201ENST00000298532 MRS2Q9HD23 443 aa22.1■■□□□ 1.13
SNAPC4-201ENST00000298532 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
SNAPC4-201ENST00000298532 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
SNAPC4-201ENST00000298532 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
SNAPC4-201ENST00000298532 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms