RNA–Protein interactions for RNA: ENST00000310942.8

CBX2-202, Transcript of chromobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX2, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-202ENST00000310942 NISCHQ9Y2I1 1504 aa34.04■■■■□ 3.04
CBX2-202ENST00000310942 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
CBX2-202ENST00000310942 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
CBX2-202ENST00000310942 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
CBX2-202ENST00000310942 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
CBX2-202ENST00000310942 PCGF6Q9BYE7 350 aa29.69■■■□□ 2.34
CBX2-202ENST00000310942 FAM9AQ8IZU1 332 aaPredicted RBP29.34■■■□□ 2.29
CBX2-202ENST00000310942 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
CBX2-202ENST00000310942 LOC105371045A0A1W2PR82 267 aa29.02■■■□□ 2.24
CBX2-202ENST00000310942 HRCP23327 699 aa28.92■■■□□ 2.22
CBX2-202ENST00000310942 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
CBX2-202ENST00000310942 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
CBX2-202ENST00000310942 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.19
CBX2-202ENST00000310942 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.16
CBX2-202ENST00000310942 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
CBX2-202ENST00000310942 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
CBX2-202ENST00000310942 CCER1Q8TC90 406 aaPredicted RBP28.21■■■□□ 2.11
CBX2-202ENST00000310942 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.11
CBX2-202ENST00000310942 RANGAP1P46060 587 aaPredicted RBP28.11■■■□□ 2.09
CBX2-202ENST00000310942 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
CBX2-202ENST00000310942 APLP2Q06481 763 aa27.96■■■□□ 2.07
CBX2-202ENST00000310942 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
CBX2-202ENST00000310942 ABCC9O60706 1549 aa27.88■■■□□ 2.05
CBX2-202ENST00000310942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
CBX2-202ENST00000310942 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
CBX2-202ENST00000310942 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
CBX2-202ENST00000310942 CENPBP07199 599 aaPredicted RBP27.58■■■□□ 2.01
CBX2-202ENST00000310942 YTHDC1Q96MU7 727 aaKnown RBP27.55■■■□□ 2
CBX2-202ENST00000310942 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
CBX2-202ENST00000310942 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
CBX2-202ENST00000310942 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
CBX2-202ENST00000310942 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
CBX2-202ENST00000310942 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
CBX2-202ENST00000310942 PELP1Q8IZL8 1130 aaKnown RBP27.18■■□□□ 1.94
CBX2-202ENST00000310942 ITGAEP38570 1179 aa27.1■■□□□ 1.93
CBX2-202ENST00000310942 CSRNP3Q8WYN3 585 aa27.02■■□□□ 1.92
CBX2-202ENST00000310942 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
CBX2-202ENST00000310942 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
CBX2-202ENST00000310942 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
CBX2-202ENST00000310942 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
CBX2-202ENST00000310942 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
CBX2-202ENST00000310942 ZNF316A6NFI3 1004 aaPredicted RBP26.74■■□□□ 1.87
CBX2-202ENST00000310942 NEUROD1Q13562 356 aa26.64■■□□□ 1.86
CBX2-202ENST00000310942 MROH2BQ7Z745 1585 aa26.61■■□□□ 1.85
CBX2-202ENST00000310942 NACADO15069 1562 aa26.55■■□□□ 1.84
CBX2-202ENST00000310942 CEP162Q5TB80 1403 aa26.52■■□□□ 1.84
CBX2-202ENST00000310942 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
CBX2-202ENST00000310942 SOGA1O94964 1423 aa26.39■■□□□ 1.82
CBX2-202ENST00000310942 NEFLP07196 543 aa26.33■■□□□ 1.81
CBX2-202ENST00000310942 WIZO95785 1651 aa26.33■■□□□ 1.81
CBX2-202ENST00000310942 P3H3Q8IVL6 736 aa26.32■■□□□ 1.8
CBX2-202ENST00000310942 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
CBX2-202ENST00000310942 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
CBX2-202ENST00000310942 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
CBX2-202ENST00000310942 MIER1Q8N108 512 aa26.29■■□□□ 1.8
CBX2-202ENST00000310942 CLIP1P30622 1438 aa26.28■■□□□ 1.8
CBX2-202ENST00000310942 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
CBX2-202ENST00000310942 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
CBX2-202ENST00000310942 GOLGA3Q08378 1498 aa26.21■■□□□ 1.79
CBX2-202ENST00000310942 EEA1Q15075 1411 aa26.15■■□□□ 1.78
CBX2-202ENST00000310942 BCANQ96GW7 911 aa26.15■■□□□ 1.78
CBX2-202ENST00000310942 CNGB1Q14028 1251 aaPredicted RBP26.11■■□□□ 1.77
CBX2-202ENST00000310942 MYT1Q01538 1121 aa26.02■■□□□ 1.76
CBX2-202ENST00000310942 POLR3GLQ9BT43 218 aa26■■□□□ 1.75
CBX2-202ENST00000310942 RUSC2Q8N2Y8 1516 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 ERICH6Q7L0X2 663 aa25.97■■□□□ 1.75
CBX2-202ENST00000310942 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
CBX2-202ENST00000310942 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
CBX2-202ENST00000310942 ARID3CA6NKF2 412 aa25.89■■□□□ 1.73
CBX2-202ENST00000310942 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
CBX2-202ENST00000310942 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
CBX2-202ENST00000310942 HIRIP3Q9BW71 556 aaPredicted RBP25.84■■□□□ 1.73
CBX2-202ENST00000310942 ANP32CO43423 234 aa25.82■■□□□ 1.72
CBX2-202ENST00000310942 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
CBX2-202ENST00000310942 VPS8Q8N3P4 1428 aa25.72■■□□□ 1.71
CBX2-202ENST00000310942 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
CBX2-202ENST00000310942 FKBP8Q14318 412 aa25.66■■□□□ 1.7
CBX2-202ENST00000310942 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
CBX2-202ENST00000310942 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
CBX2-202ENST00000310942 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
CBX2-202ENST00000310942 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
CBX2-202ENST00000310942 ZNF326Q5BKZ1 582 aaKnown RBP25.59■■□□□ 1.69
CBX2-202ENST00000310942 CHIC2Q9UKJ5 165 aa25.58■■□□□ 1.69
CBX2-202ENST00000310942 TONSLQ96HA7 1378 aa25.57■■□□□ 1.68
CBX2-202ENST00000310942 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
CBX2-202ENST00000310942 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
CBX2-202ENST00000310942 FBLN2P98095 1184 aa25.43■■□□□ 1.66
CBX2-202ENST00000310942 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
CBX2-202ENST00000310942 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
CBX2-202ENST00000310942 HNRNPUQ00839 825 aaKnown RBP eCLIP25.42■■□□□ 1.66
CBX2-202ENST00000310942 CUX2O14529 1486 aa25.38■■□□□ 1.65
CBX2-202ENST00000310942 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
CBX2-202ENST00000310942 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
CBX2-202ENST00000310942 SUPT16HQ9Y5B9 1047 aaKnown RBP25.35■■□□□ 1.65
CBX2-202ENST00000310942 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
CBX2-202ENST00000310942 IRX6P78412 446 aaPredicted RBP25.32■■□□□ 1.64
CBX2-202ENST00000310942 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
CBX2-202ENST00000310942 CDK11AQ9UQ88 783 aaPredicted RBP25.29■■□□□ 1.64
CBX2-202ENST00000310942 DHX57Q6P158 1386 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms