Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 THG1YGR024C 714 nt4.58□□□□□ -1.68
DEF1P35732 YGR045CYGR045C 363 nt4.58□□□□□ -1.68
DEF1P35732 YIR023C-AYIR023C-A 324 nt4.58□□□□□ -1.68
DEF1P35732 IDP2YLR174W 1239 nt4.58□□□□□ -1.68
DEF1P35732 YLR428CYLR428C 345 nt4.58□□□□□ -1.68
DEF1P35732 GIM3YNL153C 390 nt4.58□□□□□ -1.68
DEF1P35732 TSR4YOL022C 1227 nt4.58□□□□□ -1.68
DEF1P35732 SYC1YOR179C 567 nt4.58□□□□□ -1.68
DEF1P35732 LEE1YPL054W 906 nt4.58□□□□□ -1.68
DEF1P35732 YPR016W-AYPR016W-A 261 nt4.58□□□□□ -1.68
DEF1P35732 MAK3YPR051W 531 nt4.58□□□□□ -1.68
DEF1P35732 NAT3YPR131C 588 nt4.58□□□□□ -1.68
DEF1P35732 RRN7YJL025W 1545 nt4.57□□□□□ -1.68
DEF1P35732 BUD7YOR299W 2241 nt4.57□□□□□ -1.68
DEF1P35732 MTC4YBR255W 2085 nt4.57□□□□□ -1.68
DEF1P35732 YDL050CYDL050C 372 nt4.57□□□□□ -1.68
DEF1P35732 RPL35BYDL136W 363 nt4.57□□□□□ -1.68
DEF1P35732 SHU2YDR078C 672 nt4.57□□□□□ -1.68
DEF1P35732 SLX8YER116C 825 nt4.57□□□□□ -1.68
DEF1P35732 YGR153WYGR153W 654 nt4.57□□□□□ -1.68
DEF1P35732 YAR019W-AYAR019W-A 333 nt4.57□□□□□ -1.68
DEF1P35732 YLR400WYLR400W 474 nt4.57□□□□□ -1.68
DEF1P35732 RIM11YMR139W 1113 nt4.57□□□□□ -1.68
DEF1P35732 YBR012CYBR012C 420 nt4.57□□□□□ -1.68
DEF1P35732 IDH2YOR136W 1110 nt4.57□□□□□ -1.68
DEF1P35732 NIP7YPL211W 546 nt4.57□□□□□ -1.68
DEF1P35732 RPB5YBR154C 648 nt4.57□□□□□ -1.68
DEF1P35732 STP22YCL008C 1158 nt4.57□□□□□ -1.68
DEF1P35732 UGA3YDL170W 1587 nt4.57□□□□□ -1.68
DEF1P35732 PER1YCR044C 1074 nt4.56□□□□□ -1.68
DEF1P35732 AGA2YGL032C 264 nt4.56□□□□□ -1.68
DEF1P35732 VMA21YGR105W 234 nt4.56□□□□□ -1.68
DEF1P35732 TIM10YHR005C-A 282 nt4.56□□□□□ -1.68
DEF1P35732 YHR213WYHR213W 597 nt4.56□□□□□ -1.68
DEF1P35732 YAR062WYAR062W 597 nt4.56□□□□□ -1.68
DEF1P35732 YML084WYML084W 309 nt4.56□□□□□ -1.68
DEF1P35732 MRPL44YMR225C 297 nt4.56□□□□□ -1.68
DEF1P35732 ATX2YOR079C 942 nt4.56□□□□□ -1.68
DEF1P35732 SRB6YBR253W 366 nt4.56□□□□□ -1.68
DEF1P35732 GZF3YJL110C 1656 nt4.56□□□□□ -1.68
DEF1P35732 SWI3YJL176C 2478 nt4.56□□□□□ -1.68
DEF1P35732 HCA4YJL033W 2313 nt4.56□□□□□ -1.68
DEF1P35732 TRF5YNL299W 1929 nt4.56□□□□□ -1.68
DEF1P35732 RRP3YHR065C 1506 nt4.56□□□□□ -1.68
DEF1P35732 SYP1YCR030C 2613 nt4.55□□□□□ -1.68
DEF1P35732 UBC13YDR092W 462 nt4.55□□□□□ -1.68
DEF1P35732 MSW1YDR268W 1140 nt4.55□□□□□ -1.68
DEF1P35732 ATG27YJL178C 816 nt4.55□□□□□ -1.68
DEF1P35732 YKR011CYKR011C 1062 nt4.55□□□□□ -1.68
DEF1P35732 APS1YLR170C 471 nt4.55□□□□□ -1.68
DEF1P35732 DYN3YMR299C 939 nt4.55□□□□□ -1.68
DEF1P35732 BRX1YOL077C 876 nt4.55□□□□□ -1.68
DEF1P35732 CYM1YDR430C 2970 nt4.55□□□□□ -1.68
DEF1P35732 PRP31YGR091W 1485 nt4.55□□□□□ -1.68
DEF1P35732 AGE1YDR524C 1449 nt4.55□□□□□ -1.68
DEF1P35732 RGP1YDR137W 1992 nt4.54□□□□□ -1.68
DEF1P35732 BRE4YDL231C 3378 nt4.54□□□□□ -1.68
DEF1P35732 BIK1YCL029C 1323 nt4.54□□□□□ -1.68
DEF1P35732 MIG3YER028C 1185 nt4.54□□□□□ -1.68
DEF1P35732 YKE4YIL023C 1041 nt4.54□□□□□ -1.68
DEF1P35732 YKL023C-AYKL023C-A 228 nt4.54□□□□□ -1.68
DEF1P35732 YAR047CYAR047C 321 nt4.54□□□□□ -1.68
DEF1P35732 RPS1BYML063W 768 nt4.54□□□□□ -1.68
DEF1P35732 YMR158W-BYMR158W-B 321 nt4.54□□□□□ -1.68
DEF1P35732 DDR48YMR173W 1293 nt4.54□□□□□ -1.68
DEF1P35732 YSF3YNL138W-A 258 nt4.54□□□□□ -1.68
DEF1P35732 PSF3YOL146W 585 nt4.54□□□□□ -1.68
DEF1P35732 CAF20YOR276W 486 nt4.54□□□□□ -1.68
DEF1P35732 FMP23YBR047W 528 nt4.54□□□□□ -1.68
DEF1P35732 YBR056W-AYBR056W-A 201 nt4.54□□□□□ -1.68
DEF1P35732 CMR3YPR013C 954 nt4.54□□□□□ -1.68
DEF1P35732 APP1YNL094W 1764 nt4.54□□□□□ -1.68
DEF1P35732 RAD30YDR419W 1899 nt4.54□□□□□ -1.68
DEF1P35732 SYF1YDR416W 2580 nt4.54□□□□□ -1.68
DEF1P35732 KRI1YNL308C 1776 nt4.53□□□□□ -1.68
DEF1P35732 CDC37YDR168W 1521 nt4.53□□□□□ -1.68
DEF1P35732 TMA20YER007C-A 546 nt4.53□□□□□ -1.68
DEF1P35732 YIL171W-AYIL171W-A 453 nt4.53□□□□□ -1.68
DEF1P35732 YJL220WYJL220W 453 nt4.53□□□□□ -1.68
DEF1P35732 YJR087WYJR087W 351 nt4.53□□□□□ -1.68
DEF1P35732 ECM23YPL021W 564 nt4.53□□□□□ -1.68
DEF1P35732 YBR051WYBR051W 351 nt4.53□□□□□ -1.68
DEF1P35732 YSY6YBR162W-A 198 nt4.53□□□□□ -1.68
DEF1P35732 ACA1YER045C 1470 nt4.53□□□□□ -1.68
DEF1P35732 GEM1YAL048C 1989 nt4.53□□□□□ -1.68
DEF1P35732 YDR131CYDR131C 1671 nt4.52□□□□□ -1.69
DEF1P35732 AIM21YIR003W 2040 nt4.52□□□□□ -1.69
DEF1P35732 YGL140CYGL140C 3660 nt4.52□□□□□ -1.69
DEF1P35732 YDR526CYDR526C 471 nt4.52□□□□□ -1.69
DEF1P35732 YER145C-AYER145C-A 438 nt4.52□□□□□ -1.69
DEF1P35732 YVH1YIR026C 1095 nt4.52□□□□□ -1.69
DEF1P35732 ILM1YJR118C 612 nt4.52□□□□□ -1.69
DEF1P35732 UPS2YLR168C 693 nt4.52□□□□□ -1.69
DEF1P35732 SEC22YLR268W 645 nt4.52□□□□□ -1.69
DEF1P35732 YBL006W-AYBL006W-A 150 nt4.52□□□□□ -1.69
DEF1P35732 YMR001C-AYMR001C-A 231 nt4.52□□□□□ -1.69
DEF1P35732 ERD2YBL040C 660 nt4.52□□□□□ -1.69
DEF1P35732 YMR193C-AYMR193C-A 387 nt4.52□□□□□ -1.69
DEF1P35732 SWM2YNR004W 441 nt4.52□□□□□ -1.69
DEF1P35732 FYV5YCL058C 459 nt4.52□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 34.3 ms