RNA–Protein interactions for RNA: YOR179C

SYC1, Transcript of Subunit of the APT subcomplex of cleavage and polyadenylation factor, yeastyeast

Gene SYC1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYC1YOR179C MTC1P47018 478 aaKnown RBP13.27□□□□□ -0.29
SYC1YOR179C FAP1P53971 965 aa12.58□□□□□ -0.4
SYC1YOR179C DRS1P32892 752 aaKnown RBP12.06□□□□□ -0.48
SYC1YOR179C PRY3P47033 881 aa11.85□□□□□ -0.51
SYC1YOR179C PRI1P10363 409 aa11.5□□□□□ -0.57
SYC1YOR179C AAD16Q02895 342 aa11.49□□□□□ -0.57
SYC1YOR179C YCK3P39962 524 aa11.21□□□□□ -0.61
SYC1YOR179C ISW2Q08773 1120 aa11.1□□□□□ -0.63
SYC1YOR179C HAA1Q12753 694 aaKnown RBP11.05□□□□□ -0.64
SYC1YOR179C RPG1P38249 964 aaKnown RBP11.03□□□□□ -0.64
SYC1YOR179C TSR3Q12094 313 aaKnown RBP10.86□□□□□ -0.67
SYC1YOR179C DIP2Q12220 943 aaPredicted RBP10.57□□□□□ -0.72
SYC1YOR179C BFR2Q06631 534 aaKnown RBP10.53□□□□□ -0.72
SYC1YOR179C MRPL32P25348 183 aa10.41□□□□□ -0.74
SYC1YOR179C RSE1Q04693 1361 aaKnown RBP10.36□□□□□ -0.75
SYC1YOR179C YGL015CP33199 130 aa10.13□□□□□ -0.79
SYC1YOR179C RPL17AP05740 184 aaKnown RBP10.09□□□□□ -0.79
SYC1YOR179C RPL17BP46990 184 aaKnown RBP10.09□□□□□ -0.79
SYC1YOR179C REB1P21538 810 aa10.08□□□□□ -0.8
SYC1YOR179C AVT3P36062 692 aa10.08□□□□□ -0.8
SYC1YOR179C TFA1P36100 482 aa10.01□□□□□ -0.81
SYC1YOR179C CDC27P38042 758 aa9.82□□□□□ -0.84
SYC1YOR179C YKR023WP36119 530 aaKnown RBP9.65□□□□□ -0.86
SYC1YOR179C SPT21P35209 758 aa9.62□□□□□ -0.87
SYC1YOR179C MAP2P38174 421 aaKnown RBP9.57□□□□□ -0.88
SYC1YOR179C UBP10P53874 792 aaPredicted RBP9.57□□□□□ -0.88
SYC1YOR179C BUD31P25337 157 aaPredicted RBP9.54□□□□□ -0.88
SYC1YOR179C DCD1P06773 312 aa9.46□□□□□ -0.9
SYC1YOR179C HOP09932 586 aa9.46□□□□□ -0.9
SYC1YOR179C TFC8Q12308 588 aa9.45□□□□□ -0.9
SYC1YOR179C SCY1P53009 804 aa9.27□□□□□ -0.93
SYC1YOR179C TIF4632P39936 914 aaKnown RBP9.18□□□□□ -0.94
SYC1YOR179C SLX5P32828 619 aaKnown RBP9.17□□□□□ -0.94
SYC1YOR179C RIM101P33400 625 aa9.16□□□□□ -0.94
SYC1YOR179C TGL3P40308 642 aa9.15□□□□□ -0.94
SYC1YOR179C BCH2P36122 765 aa9.12□□□□□ -0.95
SYC1YOR179C UBP9P39967 754 aa9.03□□□□□ -0.96
SYC1YOR179C SIS1P25294 352 aaKnown RBP9.02□□□□□ -0.97
SYC1YOR179C EPS1P40557 701 aa8.85□□□□□ -0.99
SYC1YOR179C OXP1P28273 1286 aa8.84□□□□□ -0.99
SYC1YOR179C BDF1P35817 686 aa8.83□□□□□ -1
SYC1YOR179C RQC2Q12532 1038 aaKnown RBP8.73□□□□□ -1.01
SYC1YOR179C MST1P07236 462 aa8.71□□□□□ -1.02
SYC1YOR179C PTP3P40048 928 aa8.7□□□□□ -1.02
SYC1YOR179C YIL055CP40523 627 aaKnown RBP8.68□□□□□ -1.02
SYC1YOR179C YBL029C-AQ3E756 94 aa8.68□□□□□ -1.02
SYC1YOR179C YOR238WQ08634 303 aa8.65□□□□□ -1.02
SYC1YOR179C NSR1P27476 414 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
SYC1YOR179C VNX1P42839 908 aa8.56□□□□□ -1.04
SYC1YOR179C BBC1P47068 1157 aa8.56□□□□□ -1.04
SYC1YOR179C RSM7P47150 247 aa8.56□□□□□ -1.04
SYC1YOR179C AI2P03876 854 aa8.54□□□□□ -1.04
SYC1YOR179C YAP5P40574 245 aa8.51□□□□□ -1.05
SYC1YOR179C YAH1Q12184 172 aaKnown RBP8.5□□□□□ -1.05
SYC1YOR179C SSP1P38871 571 aa8.49□□□□□ -1.05
SYC1YOR179C SPP1Q03012 353 aa8.46□□□□□ -1.06
SYC1YOR179C WSC3Q12215 556 aa8.46□□□□□ -1.06
SYC1YOR179C DMA1P38823 416 aa8.36□□□□□ -1.07
SYC1YOR179C TIF11P38912 153 aaKnown RBP8.35□□□□□ -1.07
SYC1YOR179C AIR2Q12476 344 aaKnown RBP8.35□□□□□ -1.07
SYC1YOR179C YLR271WQ06152 274 aa8.34□□□□□ -1.07
SYC1YOR179C GTT3P39996 337 aa8.33□□□□□ -1.08
SYC1YOR179C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
SYC1YOR179C FKH1P40466 484 aa8.31□□□□□ -1.08
SYC1YOR179C YJL171CP46992 396 aa8.27□□□□□ -1.09
SYC1YOR179C PSD2P53037 1138 aaKnown RBP8.27□□□□□ -1.09
SYC1YOR179C PIB1Q06651 286 aa8.27□□□□□ -1.09
SYC1YOR179C LDB19Q12502 818 aa8.24□□□□□ -1.09
SYC1YOR179C ULI1P43604 169 aa8.22□□□□□ -1.09
SYC1YOR179C IOC2Q12072 812 aa8.22□□□□□ -1.09
SYC1YOR179C MRM1P25270 412 aa8.21□□□□□ -1.1
SYC1YOR179C MGA2P40578 1113 aa8.15□□□□□ -1.1
SYC1YOR179C BMT6Q12291 365 aa8.13□□□□□ -1.11
SYC1YOR179C MSB4Q12317 492 aa8.11□□□□□ -1.11
SYC1YOR179C CST9Q06032 482 aa8.08□□□□□ -1.12
SYC1YOR179C EAP1P36041 632 aaKnown RBP8.07□□□□□ -1.12
SYC1YOR179C SET4P42948 560 aa8.07□□□□□ -1.12
SYC1YOR179C YOL036WQ08206 761 aa8.07□□□□□ -1.12
SYC1YOR179C TRP5P00931 707 aaKnown RBP8.04□□□□□ -1.12
SYC1YOR179C VPS29P38759 282 aa8.04□□□□□ -1.12
SYC1YOR179C YMR1P47147 688 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
SYC1YOR179C DBP1P24784 617 aaKnown RBP8.03□□□□□ -1.12
SYC1YOR179C RTG1P32607 177 aa8.03□□□□□ -1.12
SYC1YOR179C YFR006WP43590 535 aa8.02□□□□□ -1.13
SYC1YOR179C NCR1Q12200 1170 aa7.99□□□□□ -1.13
SYC1YOR179C RTG3P38165 486 aa7.98□□□□□ -1.13
SYC1YOR179C VMA1P17255 1071 aaKnown RBP7.97□□□□□ -1.13
SYC1YOR179C STS1P38637 319 aa7.97□□□□□ -1.13
SYC1YOR179C YNL035CP53962 389 aaKnown RBP7.95□□□□□ -1.14
SYC1YOR179C SEC61P32915 480 aa7.93□□□□□ -1.14
SYC1YOR179C SAM3Q08986 587 aa7.93□□□□□ -1.14
SYC1YOR179C RCR1P38212 213 aa7.89□□□□□ -1.15
SYC1YOR179C DAN4P47179 1161 aa7.84□□□□□ -1.15
SYC1YOR179C TFG1P41895 735 aaPredicted RBP7.82□□□□□ -1.16
SYC1YOR179C RAM2P29703 316 aa7.8□□□□□ -1.16
SYC1YOR179C SAP30P38429 201 aa7.8□□□□□ -1.16
SYC1YOR179C GYP5Q12344 894 aa7.8□□□□□ -1.16
SYC1YOR179C JIP4Q03361 876 aa7.79□□□□□ -1.16
SYC1YOR179C SAS10Q12136 610 aaPredicted RBP7.79□□□□□ -1.16
SYC1YOR179C ABP1P15891 592 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms