RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeastyeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR4YOL022C MTC1P47018 478 aaKnown RBP12.85□□□□□ -0.35
TSR4YOL022C DRS1P32892 752 aaKnown RBP12.32□□□□□ -0.44
TSR4YOL022C FAP1P53971 965 aa11.02□□□□□ -0.65
TSR4YOL022C DIP2Q12220 943 aaPredicted RBP10.67□□□□□ -0.7
TSR4YOL022C PRI1P10363 409 aa10.62□□□□□ -0.71
TSR4YOL022C ISW2Q08773 1120 aa10.5□□□□□ -0.73
TSR4YOL022C AAD16Q02895 342 aa10.47□□□□□ -0.73
TSR4YOL022C AVT3P36062 692 aa10.46□□□□□ -0.73
TSR4YOL022C BFR2Q06631 534 aaKnown RBP10.43□□□□□ -0.74
TSR4YOL022C RPG1P38249 964 aaKnown RBP10.4□□□□□ -0.74
TSR4YOL022C PRY3P47033 881 aa10.37□□□□□ -0.75
TSR4YOL022C RSE1Q04693 1361 aaKnown RBP10.21□□□□□ -0.78
TSR4YOL022C TSR3Q12094 313 aaKnown RBP10.02□□□□□ -0.81
TSR4YOL022C YCK3P39962 524 aa9.96□□□□□ -0.82
TSR4YOL022C RPL17AP05740 184 aaKnown RBP9.88□□□□□ -0.83
TSR4YOL022C RPL17BP46990 184 aaKnown RBP9.88□□□□□ -0.83
TSR4YOL022C HAA1Q12753 694 aaKnown RBP9.78□□□□□ -0.84
TSR4YOL022C REB1P21538 810 aa9.75□□□□□ -0.85
TSR4YOL022C MRPL32P25348 183 aa9.6□□□□□ -0.87
TSR4YOL022C SPT21P35209 758 aa9.55□□□□□ -0.88
TSR4YOL022C TFA1P36100 482 aa9.5□□□□□ -0.89
TSR4YOL022C YKR023WP36119 530 aaKnown RBP9.34□□□□□ -0.91
TSR4YOL022C RIM101P33400 625 aa9.28□□□□□ -0.92
TSR4YOL022C CDC27P38042 758 aa9.26□□□□□ -0.93
TSR4YOL022C TFC8Q12308 588 aa9.13□□□□□ -0.95
TSR4YOL022C HOP09932 586 aa9.1□□□□□ -0.95
TSR4YOL022C YGL015CP33199 130 aa9.1□□□□□ -0.95
TSR4YOL022C DCD1P06773 312 aa9.05□□□□□ -0.96
TSR4YOL022C OXP1P28273 1286 aa8.99□□□□□ -0.97
TSR4YOL022C UBP10P53874 792 aaPredicted RBP8.93□□□□□ -0.98
TSR4YOL022C MAP2P38174 421 aaKnown RBP8.91□□□□□ -0.98
TSR4YOL022C BCH2P36122 765 aa8.83□□□□□ -1
TSR4YOL022C SCY1P53009 804 aa8.77□□□□□ -1.01
TSR4YOL022C YIL055CP40523 627 aaKnown RBP8.75□□□□□ -1.01
TSR4YOL022C PTP3P40048 928 aa8.73□□□□□ -1.01
TSR4YOL022C YAH1Q12184 172 aaKnown RBP8.69□□□□□ -1.02
TSR4YOL022C RSM7P47150 247 aa8.68□□□□□ -1.02
TSR4YOL022C EPS1P40557 701 aa8.65□□□□□ -1.02
TSR4YOL022C SLX5P32828 619 aaKnown RBP8.64□□□□□ -1.03
TSR4YOL022C YLR271WQ06152 274 aa8.62□□□□□ -1.03
TSR4YOL022C SSP1P38871 571 aa8.6□□□□□ -1.03
TSR4YOL022C BDF1P35817 686 aa8.59□□□□□ -1.03
TSR4YOL022C AI2P03876 854 aa8.57□□□□□ -1.04
TSR4YOL022C BBC1P47068 1157 aa8.51□□□□□ -1.05
TSR4YOL022C TIF4632P39936 914 aaKnown RBP8.5□□□□□ -1.05
TSR4YOL022C TGL3P40308 642 aa8.5□□□□□ -1.05
TSR4YOL022C PSD2P53037 1138 aaKnown RBP8.47□□□□□ -1.05
TSR4YOL022C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
TSR4YOL022C MGA2P40578 1113 aa8.34□□□□□ -1.07
TSR4YOL022C CST9Q06032 482 aa8.34□□□□□ -1.07
TSR4YOL022C NSR1P27476 414 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
TSR4YOL022C MRM1P25270 412 aa8.27□□□□□ -1.09
TSR4YOL022C MST1P07236 462 aa8.24□□□□□ -1.09
TSR4YOL022C BUD31P25337 157 aaPredicted RBP8.22□□□□□ -1.09
TSR4YOL022C YAP5P40574 245 aa8.18□□□□□ -1.1
TSR4YOL022C YOR238WQ08634 303 aa8.17□□□□□ -1.1
TSR4YOL022C VPS29P38759 282 aa8.13□□□□□ -1.11
TSR4YOL022C RTG3P38165 486 aa8.11□□□□□ -1.11
TSR4YOL022C RCR1P38212 213 aa8.11□□□□□ -1.11
TSR4YOL022C UBP9P39967 754 aa8.07□□□□□ -1.12
TSR4YOL022C YMR1P47147 688 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
TSR4YOL022C STS1P38637 319 aa8.02□□□□□ -1.13
TSR4YOL022C PIB1Q06651 286 aa8.02□□□□□ -1.13
TSR4YOL022C DBP1P24784 617 aaKnown RBP8□□□□□ -1.13
TSR4YOL022C YBL029C-AQ3E756 94 aa7.99□□□□□ -1.13
TSR4YOL022C RAM2P29703 316 aa7.98□□□□□ -1.13
TSR4YOL022C YFR006WP43590 535 aa7.98□□□□□ -1.13
TSR4YOL022C GTT3P39996 337 aa7.94□□□□□ -1.14
TSR4YOL022C VNX1P42839 908 aa7.94□□□□□ -1.14
TSR4YOL022C VMA1P17255 1071 aaKnown RBP7.91□□□□□ -1.14
TSR4YOL022C WSC3Q12215 556 aa7.91□□□□□ -1.14
TSR4YOL022C MAK11P20484 414 aaKnown RBP7.89□□□□□ -1.15
TSR4YOL022C SAM3Q08986 587 aa7.88□□□□□ -1.15
TSR4YOL022C YOL036WQ08206 761 aa7.84□□□□□ -1.15
TSR4YOL022C TIF11P38912 153 aaKnown RBP7.83□□□□□ -1.16
TSR4YOL022C SPP1Q03012 353 aa7.83□□□□□ -1.16
TSR4YOL022C MSB4Q12317 492 aa7.83□□□□□ -1.16
TSR4YOL022C EDS1P38073 919 aa7.81□□□□□ -1.16
TSR4YOL022C SIS1P25294 352 aaKnown RBP7.8□□□□□ -1.16
TSR4YOL022C SET4P42948 560 aa7.79□□□□□ -1.16
TSR4YOL022C COQ8P27697 501 aa7.77□□□□□ -1.17
TSR4YOL022C IOC2Q12072 812 aa7.76□□□□□ -1.17
TSR4YOL022C ULI1P43604 169 aa7.75□□□□□ -1.17
TSR4YOL022C MIF2P35201 549 aa7.74□□□□□ -1.17
TSR4YOL022C PTC3P34221 468 aaKnown RBP7.73□□□□□ -1.17
TSR4YOL022C EAP1P36041 632 aaKnown RBP7.73□□□□□ -1.17
TSR4YOL022C GYP5Q12344 894 aa7.73□□□□□ -1.17
TSR4YOL022C TRP5P00931 707 aaKnown RBP7.7□□□□□ -1.18
TSR4YOL022C ABP1P15891 592 aaKnown RBP7.7□□□□□ -1.18
TSR4YOL022C FKH1P40466 484 aa7.7□□□□□ -1.18
TSR4YOL022C NOP53Q12080 455 aaKnown RBP7.69□□□□□ -1.18
TSR4YOL022C LDB19Q12502 818 aa7.69□□□□□ -1.18
TSR4YOL022C GRE2Q12068 342 aaKnown RBP7.68□□□□□ -1.18
TSR4YOL022C AIR2Q12476 344 aaKnown RBP7.66□□□□□ -1.18
TSR4YOL022C DCW1P36091 449 aa7.65□□□□□ -1.18
TSR4YOL022C HTA1P04911 132 aaKnown RBP7.64□□□□□ -1.19
TSR4YOL022C HTA2P04912 132 aa7.64□□□□□ -1.19
TSR4YOL022C GUT1P32190 709 aa7.64□□□□□ -1.19
TSR4YOL022C SET1P38827 1080 aaKnown RBP7.64□□□□□ -1.19
TSR4YOL022C ATH1P48016 1211 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms