RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeastyeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM11YMR139W MTC1P47018 478 aaKnown RBP15.42■□□□□ 0.06
RIM11YMR139W FAP1P53971 965 aa14.95□□□□□ -0.02
RIM11YMR139W PRY3P47033 881 aa14.07□□□□□ -0.16
RIM11YMR139W DRS1P32892 752 aaKnown RBP13.63□□□□□ -0.23
RIM11YMR139W AAD16Q02895 342 aa13.51□□□□□ -0.25
RIM11YMR139W PRI1P10363 409 aa13.46□□□□□ -0.25
RIM11YMR139W YCK3P39962 524 aa13.11□□□□□ -0.31
RIM11YMR139W HAA1Q12753 694 aaKnown RBP13.07□□□□□ -0.32
RIM11YMR139W ISW2Q08773 1120 aa13□□□□□ -0.33
RIM11YMR139W RPG1P38249 964 aaKnown RBP12.91□□□□□ -0.34
RIM11YMR139W TSR3Q12094 313 aaKnown RBP12.75□□□□□ -0.37
RIM11YMR139W MRPL32P25348 183 aa12.25□□□□□ -0.45
RIM11YMR139W DIP2Q12220 943 aaPredicted RBP12.23□□□□□ -0.45
RIM11YMR139W RSE1Q04693 1361 aaKnown RBP12.05□□□□□ -0.48
RIM11YMR139W YGL015CP33199 130 aa11.95□□□□□ -0.5
RIM11YMR139W REB1P21538 810 aa11.81□□□□□ -0.52
RIM11YMR139W RPL17AP05740 184 aaKnown RBP11.76□□□□□ -0.53
RIM11YMR139W RPL17BP46990 184 aaKnown RBP11.76□□□□□ -0.53
RIM11YMR139W AVT3P36062 692 aa11.48□□□□□ -0.57
RIM11YMR139W CDC27P38042 758 aa11.44□□□□□ -0.58
RIM11YMR139W BUD31P25337 157 aaPredicted RBP11.28□□□□□ -0.6
RIM11YMR139W MAP2P38174 421 aaKnown RBP11.2□□□□□ -0.62
RIM11YMR139W YKR023WP36119 530 aaKnown RBP11.19□□□□□ -0.62
RIM11YMR139W UBP10P53874 792 aaPredicted RBP11.18□□□□□ -0.62
RIM11YMR139W SPT21P35209 758 aa11.08□□□□□ -0.64
RIM11YMR139W HOP09932 586 aa11.03□□□□□ -0.64
RIM11YMR139W DCD1P06773 312 aa11.02□□□□□ -0.65
RIM11YMR139W TFC8Q12308 588 aa10.96□□□□□ -0.65
RIM11YMR139W BFR2Q06631 534 aaKnown RBP10.93□□□□□ -0.66
RIM11YMR139W SCY1P53009 804 aa10.85□□□□□ -0.67
RIM11YMR139W TIF4632P39936 914 aaKnown RBP10.8□□□□□ -0.68
RIM11YMR139W SIS1P25294 352 aaKnown RBP10.75□□□□□ -0.69
RIM11YMR139W SLX5P32828 619 aaKnown RBP10.74□□□□□ -0.69
RIM11YMR139W TGL3P40308 642 aa10.71□□□□□ -0.69
RIM11YMR139W UBP9P39967 754 aa10.69□□□□□ -0.7
RIM11YMR139W BCH2P36122 765 aa10.59□□□□□ -0.71
RIM11YMR139W RIM101P33400 625 aa10.53□□□□□ -0.72
RIM11YMR139W EPS1P40557 701 aa10.27□□□□□ -0.77
RIM11YMR139W BDF1P35817 686 aa10.24□□□□□ -0.77
RIM11YMR139W YBL029C-AQ3E756 94 aa10.19□□□□□ -0.78
RIM11YMR139W OXP1P28273 1286 aa10.17□□□□□ -0.78
RIM11YMR139W PTP3P40048 928 aa10.14□□□□□ -0.79
RIM11YMR139W YOR238WQ08634 303 aa10.12□□□□□ -0.79
RIM11YMR139W MST1P07236 462 aa10.11□□□□□ -0.79
RIM11YMR139W YIL055CP40523 627 aaKnown RBP10.11□□□□□ -0.79
RIM11YMR139W VNX1P42839 908 aa10.01□□□□□ -0.81
RIM11YMR139W BBC1P47068 1157 aa9.97□□□□□ -0.81
RIM11YMR139W SPP1Q03012 353 aa9.96□□□□□ -0.82
RIM11YMR139W WSC3Q12215 556 aa9.96□□□□□ -0.82
RIM11YMR139W YAP5P40574 245 aa9.93□□□□□ -0.82
RIM11YMR139W NSR1P27476 414 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
RIM11YMR139W RSM7P47150 247 aa9.9□□□□□ -0.82
RIM11YMR139W AI2P03876 854 aa9.89□□□□□ -0.83
RIM11YMR139W YAH1Q12184 172 aaKnown RBP9.86□□□□□ -0.83
RIM11YMR139W YJL171CP46992 396 aa9.81□□□□□ -0.84
RIM11YMR139W GTT3P39996 337 aa9.8□□□□□ -0.84
RIM11YMR139W TIF11P38912 153 aaKnown RBP9.77□□□□□ -0.85
RIM11YMR139W AIR2Q12476 344 aaKnown RBP9.76□□□□□ -0.85
RIM11YMR139W FKH1P40466 484 aa9.7□□□□□ -0.86
RIM11YMR139W PIB1Q06651 286 aa9.67□□□□□ -0.86
RIM11YMR139W LDB19Q12502 818 aa9.65□□□□□ -0.86
RIM11YMR139W ULI1P43604 169 aa9.63□□□□□ -0.87
RIM11YMR139W YLR271WQ06152 274 aa9.57□□□□□ -0.88
RIM11YMR139W BMT6Q12291 365 aa9.57□□□□□ -0.88
RIM11YMR139W IOC2Q12072 812 aa9.55□□□□□ -0.88
RIM11YMR139W MRM1P25270 412 aa9.51□□□□□ -0.89
RIM11YMR139W PSD2P53037 1138 aaKnown RBP9.48□□□□□ -0.89
RIM11YMR139W EAP1P36041 632 aaKnown RBP9.43□□□□□ -0.9
RIM11YMR139W MSB4Q12317 492 aa9.43□□□□□ -0.9
RIM11YMR139W SET4P42948 560 aa9.42□□□□□ -0.9
RIM11YMR139W RTG1P32607 177 aa9.4□□□□□ -0.9
RIM11YMR139W TRP5P00931 707 aaKnown RBP9.37□□□□□ -0.91
RIM11YMR139W YOL036WQ08206 761 aa9.37□□□□□ -0.91
RIM11YMR139W NCR1Q12200 1170 aa9.37□□□□□ -0.91
RIM11YMR139W TFA1P36100 482 aa9.33□□□□□ -0.92
RIM11YMR139W DBP1P24784 617 aaKnown RBP9.31□□□□□ -0.92
RIM11YMR139W YFR006WP43590 535 aa9.31□□□□□ -0.92
RIM11YMR139W YMR1P47147 688 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
RIM11YMR139W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
RIM11YMR139W YNL035CP53962 389 aaKnown RBP9.28□□□□□ -0.92
RIM11YMR139W SEC61P32915 480 aa9.25□□□□□ -0.93
RIM11YMR139W VPS29P38759 282 aa9.25□□□□□ -0.93
RIM11YMR139W SSP1P38871 571 aa9.24□□□□□ -0.93
RIM11YMR139W RTG3P38165 486 aa9.23□□□□□ -0.93
RIM11YMR139W TFG1P41895 735 aaPredicted RBP9.23□□□□□ -0.93
RIM11YMR139W VMA1P17255 1071 aaKnown RBP9.22□□□□□ -0.93
RIM11YMR139W CST9Q06032 482 aa9.2□□□□□ -0.94
RIM11YMR139W STS1P38637 319 aa9.19□□□□□ -0.94
RIM11YMR139W SAP30P38429 201 aa9.15□□□□□ -0.94
RIM11YMR139W SAM3Q08986 587 aa9.15□□□□□ -0.94
RIM11YMR139W MGA2P40578 1113 aa9.1□□□□□ -0.95
RIM11YMR139W RCR1P38212 213 aa9.07□□□□□ -0.96
RIM11YMR139W DAN4P47179 1161 aa9.07□□□□□ -0.96
RIM11YMR139W JIP4Q03361 876 aa9.07□□□□□ -0.96
RIM11YMR139W GYP5Q12344 894 aa9.07□□□□□ -0.96
RIM11YMR139W BCK2P33306 851 aa9.06□□□□□ -0.96
RIM11YMR139W DCW1P36091 449 aa9.04□□□□□ -0.96
RIM11YMR139W YDL129WQ07555 291 aa9.04□□□□□ -0.96
RIM11YMR139W HTA1P04911 132 aaKnown RBP9.02□□□□□ -0.97
RIM11YMR139W HTA2P04912 132 aa9.02□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms