RNA–Protein interactions for RNA: YOL146W

PSF3, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene PSF3, Length 585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSF3YOL146W MTC1P47018 478 aaKnown RBP13□□□□□ -0.33
PSF3YOL146W DRS1P32892 752 aaKnown RBP12.45□□□□□ -0.42
PSF3YOL146W FAP1P53971 965 aa11.41□□□□□ -0.58
PSF3YOL146W DIP2Q12220 943 aaPredicted RBP10.82□□□□□ -0.68
PSF3YOL146W PRI1P10363 409 aa10.8□□□□□ -0.68
PSF3YOL146W ISW2Q08773 1120 aa10.72□□□□□ -0.69
PSF3YOL146W AAD16Q02895 342 aa10.71□□□□□ -0.69
PSF3YOL146W PRY3P47033 881 aa10.69□□□□□ -0.7
PSF3YOL146W RPG1P38249 964 aaKnown RBP10.61□□□□□ -0.71
PSF3YOL146W AVT3P36062 692 aa10.49□□□□□ -0.73
PSF3YOL146W BFR2Q06631 534 aaKnown RBP10.48□□□□□ -0.73
PSF3YOL146W RSE1Q04693 1361 aaKnown RBP10.37□□□□□ -0.75
PSF3YOL146W TSR3Q12094 313 aaKnown RBP10.25□□□□□ -0.77
PSF3YOL146W YCK3P39962 524 aa10.1□□□□□ -0.79
PSF3YOL146W HAA1Q12753 694 aaKnown RBP10.04□□□□□ -0.8
PSF3YOL146W RPL17AP05740 184 aaKnown RBP10.02□□□□□ -0.81
PSF3YOL146W RPL17BP46990 184 aaKnown RBP10.02□□□□□ -0.81
PSF3YOL146W REB1P21538 810 aa9.95□□□□□ -0.82
PSF3YOL146W MRPL32P25348 183 aa9.84□□□□□ -0.83
PSF3YOL146W SPT21P35209 758 aa9.59□□□□□ -0.87
PSF3YOL146W YKR023WP36119 530 aaKnown RBP9.44□□□□□ -0.9
PSF3YOL146W TFA1P36100 482 aa9.42□□□□□ -0.9
PSF3YOL146W CDC27P38042 758 aa9.39□□□□□ -0.91
PSF3YOL146W YGL015CP33199 130 aa9.35□□□□□ -0.91
PSF3YOL146W RIM101P33400 625 aa9.34□□□□□ -0.91
PSF3YOL146W HOP09932 586 aa9.26□□□□□ -0.93
PSF3YOL146W TFC8Q12308 588 aa9.24□□□□□ -0.93
PSF3YOL146W DCD1P06773 312 aa9.21□□□□□ -0.94
PSF3YOL146W MAP2P38174 421 aaKnown RBP9.07□□□□□ -0.96
PSF3YOL146W UBP10P53874 792 aaPredicted RBP9.06□□□□□ -0.96
PSF3YOL146W OXP1P28273 1286 aa9.04□□□□□ -0.96
PSF3YOL146W BCH2P36122 765 aa8.96□□□□□ -0.98
PSF3YOL146W SCY1P53009 804 aa8.94□□□□□ -0.98
PSF3YOL146W YIL055CP40523 627 aaKnown RBP8.92□□□□□ -0.98
PSF3YOL146W PTP3P40048 928 aa8.89□□□□□ -0.99
PSF3YOL146W YAH1Q12184 172 aaKnown RBP8.83□□□□□ -1
PSF3YOL146W SLX5P32828 619 aaKnown RBP8.8□□□□□ -1
PSF3YOL146W RSM7P47150 247 aa8.78□□□□□ -1
PSF3YOL146W EPS1P40557 701 aa8.75□□□□□ -1.01
PSF3YOL146W BDF1P35817 686 aa8.72□□□□□ -1.01
PSF3YOL146W TIF4632P39936 914 aaKnown RBP8.71□□□□□ -1.02
PSF3YOL146W YLR271WQ06152 274 aa8.68□□□□□ -1.02
PSF3YOL146W AI2P03876 854 aa8.67□□□□□ -1.02
PSF3YOL146W TGL3P40308 642 aa8.67□□□□□ -1.02
PSF3YOL146W SSP1P38871 571 aa8.65□□□□□ -1.02
PSF3YOL146W BBC1P47068 1157 aa8.65□□□□□ -1.02
PSF3YOL146W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
PSF3YOL146W PSD2P53037 1138 aaKnown RBP8.5□□□□□ -1.05
PSF3YOL146W BUD31P25337 157 aaPredicted RBP8.42□□□□□ -1.06
PSF3YOL146W MGA2P40578 1113 aa8.4□□□□□ -1.06
PSF3YOL146W CST9Q06032 482 aa8.39□□□□□ -1.07
PSF3YOL146W MRM1P25270 412 aa8.38□□□□□ -1.07
PSF3YOL146W YOR238WQ08634 303 aa8.34□□□□□ -1.07
PSF3YOL146W MST1P07236 462 aa8.33□□□□□ -1.08
PSF3YOL146W NSR1P27476 414 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
PSF3YOL146W UBP9P39967 754 aa8.31□□□□□ -1.08
PSF3YOL146W YAP5P40574 245 aa8.31□□□□□ -1.08
PSF3YOL146W RTG3P38165 486 aa8.22□□□□□ -1.09
PSF3YOL146W VPS29P38759 282 aa8.18□□□□□ -1.1
PSF3YOL146W PIB1Q06651 286 aa8.18□□□□□ -1.1
PSF3YOL146W RCR1P38212 213 aa8.16□□□□□ -1.1
PSF3YOL146W RQC2Q12532 1038 aaKnown RBP8.16□□□□□ -1.1
PSF3YOL146W YBL029C-AQ3E756 94 aa8.16□□□□□ -1.1
PSF3YOL146W YMR1P47147 688 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
PSF3YOL146W GTT3P39996 337 aa8.12□□□□□ -1.11
PSF3YOL146W DBP1P24784 617 aaKnown RBP8.11□□□□□ -1.11
PSF3YOL146W YFR006WP43590 535 aa8.1□□□□□ -1.11
PSF3YOL146W WSC3Q12215 556 aa8.1□□□□□ -1.11
PSF3YOL146W VNX1P42839 908 aa8.09□□□□□ -1.11
PSF3YOL146W STS1P38637 319 aa8.08□□□□□ -1.12
PSF3YOL146W SIS1P25294 352 aaKnown RBP8.07□□□□□ -1.12
PSF3YOL146W SPP1Q03012 353 aa8.02□□□□□ -1.13
PSF3YOL146W VMA1P17255 1071 aaKnown RBP7.99□□□□□ -1.13
PSF3YOL146W RAM2P29703 316 aa7.99□□□□□ -1.13
PSF3YOL146W TIF11P38912 153 aaKnown RBP7.97□□□□□ -1.13
PSF3YOL146W SET4P42948 560 aa7.93□□□□□ -1.14
PSF3YOL146W YOL036WQ08206 761 aa7.93□□□□□ -1.14
PSF3YOL146W MAK11P20484 414 aaKnown RBP7.92□□□□□ -1.14
PSF3YOL146W SAM3Q08986 587 aa7.92□□□□□ -1.14
PSF3YOL146W MSB4Q12317 492 aa7.92□□□□□ -1.14
PSF3YOL146W ULI1P43604 169 aa7.91□□□□□ -1.14
PSF3YOL146W MIF2P35201 549 aa7.87□□□□□ -1.15
PSF3YOL146W EAP1P36041 632 aaKnown RBP7.87□□□□□ -1.15
PSF3YOL146W IOC2Q12072 812 aa7.87□□□□□ -1.15
PSF3YOL146W GYP5Q12344 894 aa7.85□□□□□ -1.15
PSF3YOL146W LDB19Q12502 818 aa7.85□□□□□ -1.15
PSF3YOL146W TRP5P00931 707 aaKnown RBP7.83□□□□□ -1.16
PSF3YOL146W COQ8P27697 501 aa7.82□□□□□ -1.16
PSF3YOL146W EDS1P38073 919 aa7.82□□□□□ -1.16
PSF3YOL146W DCW1P36091 449 aa7.79□□□□□ -1.16
PSF3YOL146W PTC3P34221 468 aaKnown RBP7.78□□□□□ -1.16
PSF3YOL146W FKH1P40466 484 aa7.78□□□□□ -1.16
PSF3YOL146W AIR2Q12476 344 aaKnown RBP7.78□□□□□ -1.16
PSF3YOL146W ABP1P15891 592 aaKnown RBP7.77□□□□□ -1.17
PSF3YOL146W GRE2Q12068 342 aaKnown RBP7.77□□□□□ -1.17
PSF3YOL146W HTA1P04911 132 aaKnown RBP7.75□□□□□ -1.17
PSF3YOL146W HTA2P04912 132 aa7.75□□□□□ -1.17
PSF3YOL146W RTG1P32607 177 aa7.74□□□□□ -1.17
PSF3YOL146W ATH1P48016 1211 aa7.74□□□□□ -1.17
PSF3YOL146W YNL035CP53962 389 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms