RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeastyeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL35BYDL136W DRS1P32892 752 aaKnown RBP12□□□□□ -0.49
RPL35BYDL136W MTC1P47018 478 aaKnown RBP11.67□□□□□ -0.54
RPL35BYDL136W BFR2Q06631 534 aaKnown RBP10.49□□□□□ -0.73
RPL35BYDL136W FAP1P53971 965 aa10.34□□□□□ -0.75
RPL35BYDL136W DIP2Q12220 943 aaPredicted RBP10.12□□□□□ -0.79
RPL35BYDL136W AVT3P36062 692 aa10.07□□□□□ -0.8
RPL35BYDL136W TFA1P36100 482 aa10.05□□□□□ -0.8
RPL35BYDL136W PRI1P10363 409 aa9.75□□□□□ -0.85
RPL35BYDL136W PRY3P47033 881 aa9.74□□□□□ -0.85
RPL35BYDL136W AAD16Q02895 342 aa9.69□□□□□ -0.86
RPL35BYDL136W ISW2Q08773 1120 aa9.51□□□□□ -0.89
RPL35BYDL136W RSE1Q04693 1361 aaKnown RBP9.46□□□□□ -0.9
RPL35BYDL136W RPG1P38249 964 aaKnown RBP9.37□□□□□ -0.91
RPL35BYDL136W YCK3P39962 524 aa9.3□□□□□ -0.92
RPL35BYDL136W HAA1Q12753 694 aaKnown RBP9.24□□□□□ -0.93
RPL35BYDL136W TSR3Q12094 313 aaKnown RBP9.12□□□□□ -0.95
RPL35BYDL136W RPL17AP05740 184 aaKnown RBP9.11□□□□□ -0.95
RPL35BYDL136W RPL17BP46990 184 aaKnown RBP9.11□□□□□ -0.95
RPL35BYDL136W REB1P21538 810 aa8.94□□□□□ -0.98
RPL35BYDL136W SPT21P35209 758 aa8.81□□□□□ -1
RPL35BYDL136W MRPL32P25348 183 aa8.8□□□□□ -1
RPL35BYDL136W RIM101P33400 625 aa8.73□□□□□ -1.01
RPL35BYDL136W RQC2Q12532 1038 aaKnown RBP8.69□□□□□ -1.02
RPL35BYDL136W PTP3P40048 928 aa8.63□□□□□ -1.03
RPL35BYDL136W YGL015CP33199 130 aa8.52□□□□□ -1.05
RPL35BYDL136W OXP1P28273 1286 aa8.51□□□□□ -1.05
RPL35BYDL136W YKR023WP36119 530 aaKnown RBP8.48□□□□□ -1.05
RPL35BYDL136W SSP1P38871 571 aa8.46□□□□□ -1.06
RPL35BYDL136W DMA1P38823 416 aa8.4□□□□□ -1.06
RPL35BYDL136W YAH1Q12184 172 aaKnown RBP8.4□□□□□ -1.06
RPL35BYDL136W CDC27P38042 758 aa8.34□□□□□ -1.07
RPL35BYDL136W YIL055CP40523 627 aaKnown RBP8.32□□□□□ -1.08
RPL35BYDL136W HOP09932 586 aa8.31□□□□□ -1.08
RPL35BYDL136W YLR271WQ06152 274 aa8.3□□□□□ -1.08
RPL35BYDL136W TFC8Q12308 588 aa8.28□□□□□ -1.08
RPL35BYDL136W DCD1P06773 312 aa8.26□□□□□ -1.09
RPL35BYDL136W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.26□□□□□ -1.09not detected
RPL35BYDL136W UBP10P53874 792 aaPredicted RBP8.22□□□□□ -1.09
RPL35BYDL136W RSM7P47150 247 aa8.21□□□□□ -1.1
RPL35BYDL136W MGA2P40578 1113 aa8.11□□□□□ -1.11
RPL35BYDL136W MAP2P38174 421 aaKnown RBP8.09□□□□□ -1.11
RPL35BYDL136W CST9Q06032 482 aa8.08□□□□□ -1.12
RPL35BYDL136W BCH2P36122 765 aa8.07□□□□□ -1.12
RPL35BYDL136W AI2P03876 854 aa8.06□□□□□ -1.12
RPL35BYDL136W PSD2P53037 1138 aaKnown RBP8.04□□□□□ -1.12
RPL35BYDL136W BBC1P47068 1157 aa7.95□□□□□ -1.14
RPL35BYDL136W EPS1P40557 701 aa7.94□□□□□ -1.14
RPL35BYDL136W BUD31P25337 157 aaPredicted RBP7.92□□□□□ -1.14
RPL35BYDL136W SCY1P53009 804 aa7.89□□□□□ -1.15
RPL35BYDL136W BDF1P35817 686 aa7.88□□□□□ -1.15
RPL35BYDL136W MRM1P25270 412 aa7.84□□□□□ -1.15
RPL35BYDL136W SLX5P32828 619 aaKnown RBP7.84□□□□□ -1.15
RPL35BYDL136W TGL3P40308 642 aa7.84□□□□□ -1.15
RPL35BYDL136W SAS10Q12136 610 aaPredicted RBP7.84□□□□□ -1.15
RPL35BYDL136W TIF4632P39936 914 aaKnown RBP7.83□□□□□ -1.16
RPL35BYDL136W RAM2P29703 316 aa7.81□□□□□ -1.16
RPL35BYDL136W RCR1P38212 213 aa7.8□□□□□ -1.16
RPL35BYDL136W RTG3P38165 486 aa7.71□□□□□ -1.18
RPL35BYDL136W LEO1P38439 464 aa7.69□□□□□ -1.18
RPL35BYDL136W SET1P38827 1080 aaKnown RBP7.67□□□□□ -1.18
RPL35BYDL136W LEU3P08638 886 aa7.65□□□□□ -1.18
RPL35BYDL136W VPS29P38759 282 aa7.64□□□□□ -1.19
RPL35BYDL136W MAK11P20484 414 aaKnown RBP7.62□□□□□ -1.19
RPL35BYDL136W UBP9P39967 754 aa7.61□□□□□ -1.19
RPL35BYDL136W YPR148CQ06523 435 aa7.58□□□□□ -1.2
RPL35BYDL136W VPS70P47161 811 aa7.57□□□□□ -1.2
RPL35BYDL136W TAF7Q05021 590 aa7.57□□□□□ -1.2
RPL35BYDL136W NSR1P27476 414 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2 RIP-Chip
RPL35BYDL136W MST1P07236 462 aa7.54□□□□□ -1.2
RPL35BYDL136W STS1P38637 319 aa7.54□□□□□ -1.2
RPL35BYDL136W COQ8P27697 501 aa7.53□□□□□ -1.2
RPL35BYDL136W YMR1P47147 688 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
RPL35BYDL136W IFH1P39520 1085 aa7.51□□□□□ -1.21
RPL35BYDL136W YFR006WP43590 535 aa7.51□□□□□ -1.21
RPL35BYDL136W CKB1P43639 278 aa7.5□□□□□ -1.21
RPL35BYDL136W DBP1P24784 617 aaKnown RBP7.49□□□□□ -1.21
RPL35BYDL136W SPB4P25808 606 aaPredicted RBP7.49□□□□□ -1.21
RPL35BYDL136W EDS1P38073 919 aa7.48□□□□□ -1.21
RPL35BYDL136W MIF2P35201 549 aa7.47□□□□□ -1.21
RPL35BYDL136W YOR238WQ08634 303 aa7.46□□□□□ -1.22
RPL35BYDL136W SIS1P25294 352 aaKnown RBP7.44□□□□□ -1.22
RPL35BYDL136W PIB1Q06651 286 aa7.43□□□□□ -1.22
RPL35BYDL136W RPN1P38764 993 aaKnown RBP7.42□□□□□ -1.22
RPL35BYDL136W NOP53Q12080 455 aaKnown RBP7.4□□□□□ -1.22
RPL35BYDL136W PBS2P08018 668 aa7.39□□□□□ -1.23
RPL35BYDL136W DSF2P38213 736 aa7.38□□□□□ -1.23
RPL35BYDL136W YAP5P40574 245 aa7.38□□□□□ -1.23
RPL35BYDL136W PTC3P34221 468 aaKnown RBP7.37□□□□□ -1.23
RPL35BYDL136W VMA1P17255 1071 aaKnown RBP7.33□□□□□ -1.24
RPL35BYDL136W REF2P42073 533 aaPredicted RBP7.33□□□□□ -1.24
RPL35BYDL136W YBL029C-AQ3E756 94 aa7.31□□□□□ -1.24
RPL35BYDL136W VNX1P42839 908 aa7.28□□□□□ -1.24
RPL35BYDL136W DMA2P53924 522 aa7.28□□□□□ -1.24
RPL35BYDL136W MAM3Q12296 706 aa7.28□□□□□ -1.24
RPL35BYDL136W IES2P40154 320 aa7.27□□□□□ -1.25
RPL35BYDL136W YNR021WP53723 404 aaKnown RBP7.25□□□□□ -1.25
RPL35BYDL136W DIT2P21595 489 aa7.24□□□□□ -1.25
RPL35BYDL136W GRE2Q12068 342 aaKnown RBP7.24□□□□□ -1.25
RPL35BYDL136W VHR2P40041 505 aa7.23□□□□□ -1.25
RPL35BYDL136W ATH1P48016 1211 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms