RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeastyeast

Gene UBC13, Length 462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC13YDR092W MTC1P47018 478 aaKnown RBP12.1□□□□□ -0.47
UBC13YDR092W DRS1P32892 752 aaKnown RBP11.9□□□□□ -0.5
UBC13YDR092W DIP2Q12220 943 aaPredicted RBP10.22□□□□□ -0.77
UBC13YDR092W FAP1P53971 965 aa10.2□□□□□ -0.78
UBC13YDR092W BFR2Q06631 534 aaKnown RBP10.19□□□□□ -0.78
UBC13YDR092W AVT3P36062 692 aa10□□□□□ -0.81
UBC13YDR092W ISW2Q08773 1120 aa9.95□□□□□ -0.82
UBC13YDR092W PRI1P10363 409 aa9.86□□□□□ -0.83
UBC13YDR092W RPG1P38249 964 aaKnown RBP9.76□□□□□ -0.85
UBC13YDR092W RSE1Q04693 1361 aaKnown RBP9.75□□□□□ -0.85
UBC13YDR092W AAD16Q02895 342 aa9.74□□□□□ -0.85
UBC13YDR092W PRY3P47033 881 aa9.53□□□□□ -0.88
UBC13YDR092W TFA1P36100 482 aa9.44□□□□□ -0.9
UBC13YDR092W RPL17AP05740 184 aaKnown RBP9.35□□□□□ -0.91
UBC13YDR092W RPL17BP46990 184 aaKnown RBP9.35□□□□□ -0.91
UBC13YDR092W TSR3Q12094 313 aaKnown RBP9.31□□□□□ -0.92
UBC13YDR092W REB1P21538 810 aa9.3□□□□□ -0.92
UBC13YDR092W HAA1Q12753 694 aaKnown RBP9.06□□□□□ -0.96
UBC13YDR092W MRPL32P25348 183 aa9.03□□□□□ -0.96
UBC13YDR092W SPT21P35209 758 aa8.97□□□□□ -0.97
UBC13YDR092W YCK3P39962 524 aa8.92□□□□□ -0.98
UBC13YDR092W RIM101P33400 625 aa8.82□□□□□ -1
UBC13YDR092W YKR023WP36119 530 aaKnown RBP8.73□□□□□ -1.01
UBC13YDR092W CDC27P38042 758 aa8.58□□□□□ -1.04
UBC13YDR092W TFC8Q12308 588 aa8.58□□□□□ -1.04
UBC13YDR092W HOP09932 586 aa8.53□□□□□ -1.04
UBC13YDR092W YGL015CP33199 130 aa8.51□□□□□ -1.05
UBC13YDR092W OXP1P28273 1286 aa8.5□□□□□ -1.05
UBC13YDR092W YIL055CP40523 627 aaKnown RBP8.48□□□□□ -1.05
UBC13YDR092W DCD1P06773 312 aa8.44□□□□□ -1.06
UBC13YDR092W PTP3P40048 928 aa8.41□□□□□ -1.06
UBC13YDR092W UBP10P53874 792 aaPredicted RBP8.37□□□□□ -1.07
UBC13YDR092W SSP1P38871 571 aa8.34□□□□□ -1.07
UBC13YDR092W YAH1Q12184 172 aaKnown RBP8.34□□□□□ -1.07
UBC13YDR092W RSM7P47150 247 aa8.32□□□□□ -1.08
UBC13YDR092W BCH2P36122 765 aa8.3□□□□□ -1.08
UBC13YDR092W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
UBC13YDR092W MAP2P38174 421 aaKnown RBP8.27□□□□□ -1.09
UBC13YDR092W YLR271WQ06152 274 aa8.24□□□□□ -1.09
UBC13YDR092W SCY1P53009 804 aa8.22□□□□□ -1.09
UBC13YDR092W BBC1P47068 1157 aa8.21□□□□□ -1.1
UBC13YDR092W AI2P03876 854 aa8.17□□□□□ -1.1
UBC13YDR092W EPS1P40557 701 aa8.15□□□□□ -1.1
UBC13YDR092W SLX5P32828 619 aaKnown RBP8.13□□□□□ -1.11
UBC13YDR092W BDF1P35817 686 aa8.1□□□□□ -1.11
UBC13YDR092W MGA2P40578 1113 aa8.1□□□□□ -1.11
UBC13YDR092W TIF4632P39936 914 aaKnown RBP8.07□□□□□ -1.12
UBC13YDR092W PSD2P53037 1138 aaKnown RBP8.06□□□□□ -1.12
UBC13YDR092W TGL3P40308 642 aa7.99□□□□□ -1.13
UBC13YDR092W CST9Q06032 482 aa7.95□□□□□ -1.14
UBC13YDR092W MRM1P25270 412 aa7.89□□□□□ -1.15
UBC13YDR092W RQC2Q12532 1038 aaKnown RBP7.89□□□□□ -1.15
UBC13YDR092W NSR1P27476 414 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
UBC13YDR092W RTG3P38165 486 aa7.83□□□□□ -1.16
UBC13YDR092W YAP5P40574 245 aa7.77□□□□□ -1.17
UBC13YDR092W YOR238WQ08634 303 aa7.74□□□□□ -1.17
UBC13YDR092W YMR1P47147 688 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
UBC13YDR092W MST1P07236 462 aa7.7□□□□□ -1.18
UBC13YDR092W VPS29P38759 282 aa7.7□□□□□ -1.18
UBC13YDR092W RCR1P38212 213 aa7.68□□□□□ -1.18
UBC13YDR092W RAM2P29703 316 aa7.65□□□□□ -1.18
UBC13YDR092W DMA1P38823 416 aa7.64□□□□□ -1.19
UBC13YDR092W MAK11P20484 414 aaKnown RBP7.63□□□□□ -1.19
UBC13YDR092W DBP1P24784 617 aaKnown RBP7.63□□□□□ -1.19
UBC13YDR092W UBP9P39967 754 aa7.6□□□□□ -1.19
UBC13YDR092W STS1P38637 319 aa7.59□□□□□ -1.19
UBC13YDR092W GTT3P39996 337 aa7.59□□□□□ -1.19
UBC13YDR092W YFR006WP43590 535 aa7.57□□□□□ -1.2
UBC13YDR092W PIB1Q06651 286 aa7.55□□□□□ -1.2
UBC13YDR092W NOP53Q12080 455 aaKnown RBP7.52□□□□□ -1.21
UBC13YDR092W VMA1P17255 1071 aaKnown RBP7.51□□□□□ -1.21
UBC13YDR092W BUD31P25337 157 aaPredicted RBP7.49□□□□□ -1.21
UBC13YDR092W COQ8P27697 501 aa7.49□□□□□ -1.21
UBC13YDR092W MIF2P35201 549 aa7.49□□□□□ -1.21
UBC13YDR092W SET1P38827 1080 aaKnown RBP7.48□□□□□ -1.21
UBC13YDR092W SAM3Q08986 587 aa7.47□□□□□ -1.21
UBC13YDR092W IFH1P39520 1085 aa7.46□□□□□ -1.22
UBC13YDR092W MSB4Q12317 492 aa7.45□□□□□ -1.22
UBC13YDR092W ABP1P15891 592 aaKnown RBP7.43□□□□□ -1.22
UBC13YDR092W WSC3Q12215 556 aa7.43□□□□□ -1.22
UBC13YDR092W VNX1P42839 908 aa7.42□□□□□ -1.22
UBC13YDR092W YBL029C-AQ3E756 94 aa7.42□□□□□ -1.22
UBC13YDR092W PTC3P34221 468 aaKnown RBP7.41□□□□□ -1.22
UBC13YDR092W EDS1P38073 919 aa7.41□□□□□ -1.22
UBC13YDR092W EAP1P36041 632 aaKnown RBP7.4□□□□□ -1.22
UBC13YDR092W YOL036WQ08206 761 aa7.4□□□□□ -1.22
UBC13YDR092W GYP5Q12344 894 aa7.4□□□□□ -1.22
UBC13YDR092W GRE2Q12068 342 aaKnown RBP7.39□□□□□ -1.23
UBC13YDR092W TIF11P38912 153 aaKnown RBP7.37□□□□□ -1.23
UBC13YDR092W ATH1P48016 1211 aa7.37□□□□□ -1.23
UBC13YDR092W SPP1Q03012 353 aa7.37□□□□□ -1.23
UBC13YDR092W SAS10Q12136 610 aaPredicted RBP7.37□□□□□ -1.23
UBC13YDR092W GUT1P32190 709 aa7.36□□□□□ -1.23
UBC13YDR092W SET4P42948 560 aa7.36□□□□□ -1.23
UBC13YDR092W YPR148CQ06523 435 aa7.35□□□□□ -1.23
UBC13YDR092W HTA1P04911 132 aaKnown RBP7.32□□□□□ -1.24
UBC13YDR092W HTA2P04912 132 aa7.32□□□□□ -1.24
UBC13YDR092W ULI1P43604 169 aa7.32□□□□□ -1.24
UBC13YDR092W DCW1P36091 449 aa7.29□□□□□ -1.24
UBC13YDR092W CKB1P43639 278 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms