Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC9CQ8N5M4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 MIR939-201ENST00000401314 82 ntBASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 AC091305.1-201ENST00000479476 895 ntBASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 AL031432.3-201ENST00000607698 485 ntBASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 AL136967.2-201ENST00000623968 743 ntBASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 AP004607.7-201ENST00000527152 1677 ntBASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC9CQ8N5M4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TTC9CQ8N5M4 FBXW4P1-201ENST00000426721 2239 ntBASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 AF213884.3-201ENST00000563833 479 ntBASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 SMUG1P1-201ENST00000590640 811 ntBASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC9CQ8N5M4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 AC010542.4-201ENST00000563151 1910 ntBASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 TSPY26P-201ENST00000476365 1326 ntBASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC9CQ8N5M4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 SUDS3P1-201ENST00000505831 966 ntBASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TTC9CQ8N5M4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms