Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.88■□□□□ 0.77
SDF2Q99470 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDF2Q99470 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDF2Q99470 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDF2Q99470 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.88■□□□□ 0.77
SDF2Q99470 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.88■□□□□ 0.77
SDF2Q99470 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SDF2Q99470 AC099791.1-201ENST00000416440 715 ntBASIC19.88■□□□□ 0.77
SDF2Q99470 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 IGHV3-19-201ENST00000521488 291 ntBASIC19.88■□□□□ 0.77
SDF2Q99470 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SDF2Q99470 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.88■□□□□ 0.77
SDF2Q99470 AP004607.7-201ENST00000527152 1677 ntBASIC19.87■□□□□ 0.77
SDF2Q99470 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.87■□□□□ 0.77
SDF2Q99470 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 AC027682.1-201ENST00000562846 899 ntBASIC19.87■□□□□ 0.77
SDF2Q99470 AL034346.1-201ENST00000568244 1277 ntBASIC19.87■□□□□ 0.77
SDF2Q99470 AL355001.2-201ENST00000620617 1191 ntBASIC19.87■□□□□ 0.77
SDF2Q99470 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SDF2Q99470 AC007375.3-201ENST00000600936 2314 ntBASIC19.87■□□□□ 0.77
SDF2Q99470 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
SDF2Q99470 AC244015.2-201ENST00000616358 1861 ntBASIC19.86■□□□□ 0.77
SDF2Q99470 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 AP001330.3-201ENST00000520123 633 ntBASIC19.86■□□□□ 0.77
SDF2Q99470 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SDF2Q99470 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
SDF2Q99470 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.86■□□□□ 0.77
SDF2Q99470 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SDF2Q99470 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SDF2Q99470 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.85■□□□□ 0.77
SDF2Q99470 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SDF2Q99470 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SDF2Q99470 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.85■□□□□ 0.77
SDF2Q99470 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.85■□□□□ 0.77
SDF2Q99470 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 SMUG1P1-201ENST00000590640 811 ntBASIC19.85■□□□□ 0.77
SDF2Q99470 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.85■□□□□ 0.77
SDF2Q99470 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SDF2Q99470 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.85■□□□□ 0.77
SDF2Q99470 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
SDF2Q99470 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
SDF2Q99470 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SDF2Q99470 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDF2Q99470 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SDF2Q99470 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDF2Q99470 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.84■□□□□ 0.77
SDF2Q99470 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SDF2Q99470 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.84■□□□□ 0.77
SDF2Q99470 AL031432.3-201ENST00000607698 485 ntBASIC19.84■□□□□ 0.77
SDF2Q99470 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SDF2Q99470 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDF2Q99470 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.84■□□□□ 0.77
SDF2Q99470 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SDF2Q99470 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.83■□□□□ 0.77
SDF2Q99470 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SDF2Q99470 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SDF2Q99470 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SDF2Q99470 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SDF2Q99470 MIR939-201ENST00000401314 82 ntBASIC19.83■□□□□ 0.77
SDF2Q99470 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.83■□□□□ 0.77
SDF2Q99470 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SDF2Q99470 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.83■□□□□ 0.76
SDF2Q99470 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.83■□□□□ 0.76
SDF2Q99470 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SDF2Q99470 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SDF2Q99470 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SDF2Q99470 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.83■□□□□ 0.76
SDF2Q99470 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SDF2Q99470 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SDF2Q99470 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms