Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.71■■□□□ 1.39
COL1A2P08123 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A2P08123 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.7■■□□□ 1.38
COL1A2P08123 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.7■■□□□ 1.38
COL1A2P08123 MYCNOS-205ENST00000641950 531 ntBASIC23.7■■□□□ 1.38
COL1A2P08123 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL1A2P08123 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A2P08123 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.7■■□□□ 1.38
COL1A2P08123 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A2P08123 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL1A2P08123 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A2P08123 AC053503.5-201ENST00000601508 636 ntBASIC23.69■■□□□ 1.38
COL1A2P08123 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.69■■□□□ 1.38
COL1A2P08123 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
COL1A2P08123 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A2P08123 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL1A2P08123 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
COL1A2P08123 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
COL1A2P08123 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A2P08123 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL1A2P08123 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.68■■□□□ 1.38
COL1A2P08123 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
COL1A2P08123 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.68■■□□□ 1.38
COL1A2P08123 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.68■■□□□ 1.38
COL1A2P08123 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A2P08123 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A2P08123 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A2P08123 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL1A2P08123 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.68■■□□□ 1.38
COL1A2P08123 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.68■■□□□ 1.38
COL1A2P08123 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.67■■□□□ 1.38
COL1A2P08123 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.67■■□□□ 1.38
COL1A2P08123 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.67■■□□□ 1.38
COL1A2P08123 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.67■■□□□ 1.38
COL1A2P08123 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL1A2P08123 CROCCP5-201ENST00000436658 830 ntBASIC23.66■■□□□ 1.38
COL1A2P08123 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.66■■□□□ 1.38
COL1A2P08123 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.66■■□□□ 1.38
COL1A2P08123 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL1A2P08123 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
COL1A2P08123 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL1A2P08123 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL1A2P08123 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.65■■□□□ 1.38
COL1A2P08123 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.65■■□□□ 1.38
COL1A2P08123 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
COL1A2P08123 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
COL1A2P08123 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.65■■□□□ 1.38
COL1A2P08123 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 HLA-L-209ENST00000420110 1011 ntBASIC23.65■■□□□ 1.38
COL1A2P08123 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 AC006970.2-201ENST00000450065 779 ntBASIC23.65■■□□□ 1.38
COL1A2P08123 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL1A2P08123 DUX4L16-201ENST00000555130 1264 ntBASIC23.65■■□□□ 1.38
COL1A2P08123 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.65■■□□□ 1.38
COL1A2P08123 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.65■■□□□ 1.38
COL1A2P08123 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.65■■□□□ 1.38
COL1A2P08123 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.65■■□□□ 1.38
COL1A2P08123 AC231657.2-201ENST00000624556 255 ntBASIC23.65■■□□□ 1.38
COL1A2P08123 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.64■■□□□ 1.37
COL1A2P08123 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL1A2P08123 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL1A2P08123 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.64■■□□□ 1.37
COL1A2P08123 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 AC127496.7-201ENST00000625110 1798 ntBASIC23.63■■□□□ 1.37
COL1A2P08123 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL1A2P08123 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.63■■□□□ 1.37
COL1A2P08123 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms