Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 RARRES2P1-201ENST00000474487 481 ntBASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MIR6724-1-201ENST00000616420 92 ntBASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MIR6724-2-201ENST00000616483 92 ntBASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MIR6724-4-201ENST00000617390 92 ntBASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 MIR6724-3-201ENST00000622482 92 ntBASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHA13Q9Y5I0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHA13Q9Y5I0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 AC006455.2-201ENST00000429931 906 ntBASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 AC009299.2-201ENST00000482477 511 ntBASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 OR7E47P-201ENST00000546390 1422 ntBASIC22.99■■□□□ 1.27
PCDHA13Q9Y5I0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 UNC93B8-201ENST00000511903 705 ntBASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 pRNA.6-201ENST00000610482 90 ntBASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 pRNA.5-201ENST00000612139 90 ntBASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 pRNA.11-201ENST00000618423 90 ntBASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 pRNA.13-201ENST00000619112 90 ntBASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHA13Q9Y5I0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
PCDHA13Q9Y5I0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHA13Q9Y5I0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.27
PCDHA13Q9Y5I0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHA13Q9Y5I0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHA13Q9Y5I0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHA13Q9Y5I0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.95■■□□□ 1.26
PCDHA13Q9Y5I0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms