Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 AC142381.2-201ENST00000566120 298 ntBASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 AC008764.7-201ENST00000593779 1081 ntBASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 CA15P2-201ENST00000611168 834 ntBASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00474Q9P2X8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00474Q9P2X8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 AC099791.1-201ENST00000416440 715 ntBASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 IGHV3-19-201ENST00000521488 291 ntBASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00474Q9P2X8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 AL391422.3-201ENST00000603791 2761 ntBASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 OXCT2P1-201ENST00000447263 1535 ntBASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 MIR939-201ENST00000401314 82 ntBASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 AP001330.3-201ENST00000520123 633 ntBASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 AC005837.3-201ENST00000612163 286 ntBASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00474Q9P2X8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms